Gene Amuc_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0100 
Symbol 
ID6274965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp125638 
End bp126045 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content61% 
IMG OID642612145 
ProductNUDIX hydrolase 
Protein accessionYP_001876726 
Protein GI187734614 
COG category 
COG ID 
TIGRFAM ID[TIGR00586] mutator mutT protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGC TGGACGTCTG CTGTGCCCTG ATTGAACTGC CCGCCGCACG GGGCCCTCTT 
CTTCTGGGCG CCAAAAAGAA AACGGGGCAG TCCAACGGGC TTCTTTACGA ATTCCCCGGC
GGAAAAGTGG AACCAGGGGA GAATGCCCGG CACGCCGTCA TACGGGAAAT ACGGGAAGAG
CTGGGATGCA CCGTCTTCCC CGTCCGCATG CTCACCCCCG TACGGCACCG GGAGCCTGAA
CGCATTATCC GCCTTATCCC CTTTCTGTGC CGTCTGGAAC TTTGCGCCCT GCCCCGGCCT
CTGGAACATG AAAACCTGGG GTTCTTCTCC CGCCGTACGC TGGAAGAACT GCCCTGGGCG
CCTGCGGACC GCCTTGTGTT AAAGGAATGG CTGGAAGAAC ACCGCTGA
 
Protein sequence
MNTLDVCCAL IELPAARGPL LLGAKKKTGQ SNGLLYEFPG GKVEPGENAR HAVIREIREE 
LGCTVFPVRM LTPVRHREPE RIIRLIPFLC RLELCALPRP LEHENLGFFS RRTLEELPWA
PADRLVLKEW LEEHR