| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0088 |
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| Symbol | |
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| ID | 6275001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 114937 |
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| End bp | 116889 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642612133 |
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| Product | hypothetical protein |
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| Protein accession | YP_001876714 |
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| Protein GI | 187734602 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGACT CTCCCCCCAG CACCTCCCCC GCTCCGCGCA TTGCTGAAAC TGCCGCCGGG
AAAATTCTGG CGGGCCTCCT GGCCCTTTTT TACATCTTCC TGGCAACGAC GGCGGCAGGC
GGGGAATGGC ACACCCTTTT CCTTCCCGCC TGCTTTCTGG CGGCAGCCCT CCTGCTGTTC
TGCTTCTGTA TTCTCCGGGG ATACAAGATT CCCAGCCCCG GACTGCCGGG CTGGCTGGCC
CTGGGCCTGG GAGGCGGCTA TTTCCTTGTC CGGGCATGGT TTTCCCCCTG GTTTTATTAT
GAGAGCGTAG CGGATCTGGG CCTTATCGCC ACGGCCATCG TCATGTTCGC GGCGGGAACG
TATGCCGGAG CCGGAAACGG GGAAAAGAGC ATTCTTCCCG TACTGGCTGC GGCATTGGGG
CTGCTGAATG CCCTGCTGTG GGGGTATCAG AACATAACGG GAACGGAAGC CTCCTGGTTC
AGACCGGATT ATTCCCTGTT CGGCACGGAA ATCCGCAATA TCGGATTGTT CGGATACAAA
AATTTTTCCG CCCATTTCCT GTCCGTCACC GGTTTTTTCC TTTGCGCATA CAGCATGGCT
TCCGCCAGAA AATGGGGCAT CCGCCTGTTC ACGGGATTGG CGCTCATCCT CGTTTCCTTC
ACGTGCGGCT CGCGGTCCGC CTTCCCAAAC GCCCTGGCTG GCGTAACCCT GTGCTTCTTT
ATTTATACCT CCAGCGTTTT CCGCAATAAC AGAAAATTTT ACACGGCGTC CATCCTCTTT
ATTATCCTGC TTTTCCTGGG CACGTCCTAT GCCGTGCTGG ATTTGTCCCG GGGGGCGGGC
AGGCTTGCCG CCCTTCTGGA TACGTTTTCC TTCGGCAACC GGCTGGACCT GTCCAAACTG
GCCTGGGCGC TGGCGGACCA GGCTCCGCTG TTCGGTCACG GCAGCCGGAT GTACACCAAT
CTTTCCACGG AGTTTTTCTC CGGAGCCAAC CTCCCCAATT TTGCCCACCA CGAATACGCA
CAAGCCGCCT GCGACTACGG CTATGCCGGG CTGGGGCTGA TGCTAGCTCT GCTGGCCCTG
TTTCTTATTT TCGGACTCCG GAGCGTTCTG AAATTGTCAG GAGAACATCA ACGGCCCAAT
CCTCTGGGAC CGGCGGCGTT CTGCGTATTG TGCATCGCCG CTTTCCACGC CTATGGGGAA
TTCATCTGGC ATAACCCTGC CTTGCTTGGA GCCAGCGCCC TATGCGGCGG CATTACCTGC
ACGGCCCCTC TTTCCAGGGT GAAGGCTTCG CGCCAAGCCG GCCGCTGGCT TCAAGCGACC
GCCGCACTGC TGATGGCCAT ATTGGCGCTG TGTTATGCGT TTCTGGCTTT TCCGGTCTGG
AAAAACTCCC TTCAAGCCGT CCCGGCTTCC TCCGGCAACC GGCTGCCCAT GCTGGAAGCG
GCCGCCTCCT GCAGCCTGGA CCCGGATTTG GTGCGGCGCA ACATTCTGCA TGCCGCAGGC
AGTTCTCCCC CCCCAAACCC GGCCCGGCTC AAAGCATTGG AGCATCAGGA AGAAAAAGCG
GAATTACTGA GCCCCGGAAA CCACGGCCTG ACGGCGGCTA AAAGCCTCCT TTACATCCTG
CAGGGACGCC TCACGGAAGC GGAGCAACTG CTCCGCCCAT ACGTAGAGAG TCCCGGCAGG
TTTGATGACC GAATGTTCGC CTGGACTACC ATTTACAATA ATATGCTGTA TTCCTGGAGT
ACGGCCATTG CTGCCCAGTC CCCCGGACGC GCCCTGTCCA TGGCCATGAC GGCCCAGCGC
CTGATGTCCG CCCAAACGGA CCGGTGGCTG TATTATGGGG CCCTGGATCC CGAAGTCAGG
AAAAAACACT ACTCGCGCCT CAATGAGCTC AAGATGCTCA TCATGATGCT TCAGGCCCGC
GGAACGACGC CCGACCCTTC CTGGAGGAAA TAG
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| Protein sequence | MPDSPPSTSP APRIAETAAG KILAGLLALF YIFLATTAAG GEWHTLFLPA CFLAAALLLF
CFCILRGYKI PSPGLPGWLA LGLGGGYFLV RAWFSPWFYY ESVADLGLIA TAIVMFAAGT
YAGAGNGEKS ILPVLAAALG LLNALLWGYQ NITGTEASWF RPDYSLFGTE IRNIGLFGYK
NFSAHFLSVT GFFLCAYSMA SARKWGIRLF TGLALILVSF TCGSRSAFPN ALAGVTLCFF
IYTSSVFRNN RKFYTASILF IILLFLGTSY AVLDLSRGAG RLAALLDTFS FGNRLDLSKL
AWALADQAPL FGHGSRMYTN LSTEFFSGAN LPNFAHHEYA QAACDYGYAG LGLMLALLAL
FLIFGLRSVL KLSGEHQRPN PLGPAAFCVL CIAAFHAYGE FIWHNPALLG ASALCGGITC
TAPLSRVKAS RQAGRWLQAT AALLMAILAL CYAFLAFPVW KNSLQAVPAS SGNRLPMLEA
AASCSLDPDL VRRNILHAAG SSPPPNPARL KALEHQEEKA ELLSPGNHGL TAAKSLLYIL
QGRLTEAEQL LRPYVESPGR FDDRMFAWTT IYNNMLYSWS TAIAAQSPGR ALSMAMTAQR
LMSAQTDRWL YYGALDPEVR KKHYSRLNEL KMLIMMLQAR GTTPDPSWRK
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