Gene Amuc_0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0083 
Symbol 
ID6275030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp109564 
End bp110103 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content48% 
IMG OID642612126 
Producthypothetical protein 
Protein accessionYP_001876709 
Protein GI187734597 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0982253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TCTTCCGGTA TTTAGTACTT CTGGCAAGCC TGTCCCTCCA TGCGGTTGCG 
TGGGGGGACA TGGCCGACAA CGGAGTGGAA TGCTCCGTGG TGATGGAAAA AACCGAATTT
GACGCGAGGG CTGCCTTCCC TGACTTCAAG CTGGTGTTCA CGAACAAGGG CGAAAAGACC
GTGCGTCTTT TCGATGACTT CTATCCTCTC AAGGATAACG GCCCGAATAT TTTCATAAAG
ATTTTTCAAA AACAAACACG AGGGCAGAAG AAAGAAGCTG CGTGGTACAA CCCCAGGTAT
CAAATTGAGC GAGGACGTTT CTTGAACTTC ATCGCGCTGA AGCCCGGAGA GAAGCATGAA
GTGCTCATTA AGGATGCGTA CCTGCTAATG CTCTATCTTA AACCTTTTCG CCGTCTTATC
AATGGTGAGA ACTACGAGTT GGAAGTTAGT TTCCATGACG GATATGGAGA TCCCGGTGTT
CGGAGGAAGT ATGTAGGAAG AAAAGATTTC TCCGTGGTCG ATCAATCGCC CTGGAGATAG
 
Protein sequence
MKKIFRYLVL LASLSLHAVA WGDMADNGVE CSVVMEKTEF DARAAFPDFK LVFTNKGEKT 
VRLFDDFYPL KDNGPNIFIK IFQKQTRGQK KEAAWYNPRY QIERGRFLNF IALKPGEKHE
VLIKDAYLLM LYLKPFRRLI NGENYELEVS FHDGYGDPGV RRKYVGRKDF SVVDQSPWR