Gene Amuc_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0078 
Symbol 
ID6275041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp101329 
End bp103947 
Gene Length2619 bp 
Protein Length872 aa 
Translation table11 
GC content60% 
IMG OID642612121 
Productserine/threonine protein kinase 
Protein accessionYP_001876704 
Protein GI187734592 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGCG GCAACCTGCC GACGCTGCCC GTCAAGCGGG TGGTGCGTCC CACTCCCTCC 
ATTCCGGACC ATGAAGTTGT ACGCCAGATA GGGAGCGGCG CGTACGGAGA AGTATGGCTG
GCAAAATCCC TGACCGGGGC GTGGCGCGCC GTCAAAATCG TATGGAGGGA GGATTTTGAA
GACGAGCGCT CTTTCAACCG GGAATTTGAG GGCATTCTCC AGTATGAACC CATCGCCCGC
AACCATCCGG GGCTGGTCCA TATCCTGCAT GTAGGGAGGC ATGACCAGGA TTCCCCGTTT
TATTATTACG TCATGGAACT GGGCGACGAC GCCCGCACCG GAGTTCATAT TACACCGGAC
GAATATATTC CGCGCACGCT CCAGACGGAC AAGAAGTTTT CCGGCAACAA GCCTCTTCCC
CTGGATTACT GCCTGGAGGT AGGCAGCCAG CTGGCCCACG CCCTGCTGTA CCTGCACAGC
AAGAACCTGA CGCACCGGGA CATCAAGCCG GCGAACGTCA TCTTTGTCAA CGGGCGCCCC
AAACTGGCGG ACATAGGCCT GGTGGCCCAT CTGGACCAGC GCAGCTTTGT AGGGACGGAG
GGATTCATCC CCCCCGACGG CCCCGGCACC CGGCGGGCGG ACGTTTACGC GCTGGCCAAG
GTTCTGTATG AAATCAGCAC GGGAAAGGAC CGCATGGATT TTCCCGAACT CCCGGATGAC
TTGCCGGAAG GCACCGTGCG CAAGAAATGG CAGGCCTTCA ACACCATCAT TTGCCAGGCG
GCGGAACCCC GCATTGAAGA ATGCTCCATT GATTCCGCAG AGGAGCTGGC GGAAAAAATA
GACGCCCTCC GGGGGTATGA AGTGCCTTCC CGTTTCCGTC TTCAGAAGAA AAAGAAACGC
CGCAAACTCA GACGGGCCCT CCAACTTCTG GCTGCAGCCG CCGCCGGAGC CCTGACTGCC
TACTGGGGGG CTTTATGGCT CAACAACAGC CAGCATCCGC CGGAGGAACC TGCCTCGGAT
ATTCATCCGG ATATCCACTC ATCCGCTCCG GAAGAAGAAT CCCGGACCGG ATACGTGCTG
GTGACCAGCT CCCCGGCGGG AGCGTCCGTG TATGATGCGG ACGGCAACTA TCTGGATGAA
ACTCCCTACG GCCCCATTGA ACTGCCTTCC GGCTCCCCGG TAGCCTATAC CATCAAGAAA
TCGGGGTTTG CGGACAAGGA AGAGGCGGGA ACCGTCAAAG GAGGGTCCAC GCTGGCCCTG
GGCGGCGTGC TGAAAGAGTA CCATCCCCCT ACGGACAGCC AGCCCTGGAA GGATACGGAG
GGTGTTACGT ACCTGCCCGC AGAAACGCGC CATGTGGCGC AAGGCCCCCT TACCGCCGCC
CTGTTCAACA AATTTCTGAA GGAGGACCGC CAGAAAGGGA ACTTCCAGAT GAAAAGGGAA
CAGACGGAAC CGGGGCATCC GGAGAAGGAT GTGGCCCTGC TCACGCAGGA CGGCATCACG
GCCTACCTGG CGTGGCTGAA CAAGAAATGC GAGCGGGAGG GGCTGCTGGG CAAGGAATTT
TCCATCAATG CGGATCCGCT TCCGCAGGCT TCCGGCAGCA CGGAAAACCA CAATGCCTAC
GTCCTGAACG TCACCCGCGT GTTCCAGGTG CCCATTACCG TCACCACCAA TCCGCCGGGA
GCCAGCGTTT TTTTCAATAA CAGGCTCATC GGGCGTACCC CCATTGAAGA ATACGTCAAC
CAGGTTCCCT ACGTCATTGA AATCAAACTG CCGGGGCACG CCACCATGCG TCGCAGGGGG
CTGGATCCGC AGGACTTATA CCTTTCCCTG CAGTTGGAAC CGGACAAGTC TGTCGTTTTT
GGCTCGCCCT GGACCAACAG CCTGGGCATC AAACTGGTCC CTGTGGGTGG GAATGCTCTG
GTCATGACCC ACGAAGTGCG CGTAAAGGAC TTTCAGGAAT TCCTGAAAGC TACCGGAAGG
AAAGCTCCGG CCCGGCCCGG CTTTCCCCAG GGAGAAGACC ACCCGGTGGT GAATGTCAGC
AGGCAGGATG CGCGCGCCTT CGCCAGATGG CTTACCAGCA AAGAGCGGGC CCTGGGCCTG
ATTGATCAGC ACGACTCCTA CCGTCTTCCC AAGGATGAGG AATGGAGTTC CTGGGTGCGT
CTGACGGATG AACAGGGAGC CTCCCCCTAT GAAAAGACGC TGCCTCATGA AAACTCCCGG
GAAGCCTTCC CGTGGGGGTA TTCATGGCCG CCGCCTGATA AAACGGGAAA TTTTGCGGAC
CAGTCCGCCC TGATTTACCT GCCGTCCTCC CGCGTTATCG TAGGATATAA CGACGGACAG
CCGTATACGG CCCCCGTAAA AACCTTTCCG CCCAACCACC TGGGCCTGTA CGACCTGGAA
GGAAACGTCA TGGAATGGGT AGACGATTCC TACGGGGGGC CGGAATCCCT CCCCATCCGC
AACTACGGCG TCGCCCGCGG AGGCAGCTAC CTGTCCTTCC GCCCCAAACA GCTCACCACT
TCCATCCGCA CTCCCCTGCC GGAAAATACG AGGGATAACG CGCTGGGCTT CCGTCTTATC
CTGTCTTCCG AACGCCCCGC CATTCCAACA GCTCCCTGA
 
Protein sequence
MPGGNLPTLP VKRVVRPTPS IPDHEVVRQI GSGAYGEVWL AKSLTGAWRA VKIVWREDFE 
DERSFNREFE GILQYEPIAR NHPGLVHILH VGRHDQDSPF YYYVMELGDD ARTGVHITPD
EYIPRTLQTD KKFSGNKPLP LDYCLEVGSQ LAHALLYLHS KNLTHRDIKP ANVIFVNGRP
KLADIGLVAH LDQRSFVGTE GFIPPDGPGT RRADVYALAK VLYEISTGKD RMDFPELPDD
LPEGTVRKKW QAFNTIICQA AEPRIEECSI DSAEELAEKI DALRGYEVPS RFRLQKKKKR
RKLRRALQLL AAAAAGALTA YWGALWLNNS QHPPEEPASD IHPDIHSSAP EEESRTGYVL
VTSSPAGASV YDADGNYLDE TPYGPIELPS GSPVAYTIKK SGFADKEEAG TVKGGSTLAL
GGVLKEYHPP TDSQPWKDTE GVTYLPAETR HVAQGPLTAA LFNKFLKEDR QKGNFQMKRE
QTEPGHPEKD VALLTQDGIT AYLAWLNKKC EREGLLGKEF SINADPLPQA SGSTENHNAY
VLNVTRVFQV PITVTTNPPG ASVFFNNRLI GRTPIEEYVN QVPYVIEIKL PGHATMRRRG
LDPQDLYLSL QLEPDKSVVF GSPWTNSLGI KLVPVGGNAL VMTHEVRVKD FQEFLKATGR
KAPARPGFPQ GEDHPVVNVS RQDARAFARW LTSKERALGL IDQHDSYRLP KDEEWSSWVR
LTDEQGASPY EKTLPHENSR EAFPWGYSWP PPDKTGNFAD QSALIYLPSS RVIVGYNDGQ
PYTAPVKTFP PNHLGLYDLE GNVMEWVDDS YGGPESLPIR NYGVARGGSY LSFRPKQLTT
SIRTPLPENT RDNALGFRLI LSSERPAIPT AP