Gene Amuc_0067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0067 
Symbol 
ID6275074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp90682 
End bp91158 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content55% 
IMG OID642612109 
ProductGatB/YqeY domain protein 
Protein accessionYP_001876693 
Protein GI187734581 
COG category[S] Function unknown 
COG ID[COG1610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.222802 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTAG TTAATGGAGA TATGAACACG ATTTCCGACC AAATCATGGA GGGGATGAAA 
ACCGCCATGA AAGCAAAAGA CTCCGTTACC CTCAATACCC TGCGCGCCCT CAAGACGGCT
CTCACGAACA CGGCCATCGC CAAGGGAGGC TTGGGAACCC GGCTGGAAGA AGCGGAAGAA
CTGGCCGTGG TCCGCAAGCA AATCAAGCAG CGTGAGGATT CTGCGGAACA ATTCCGCGCC
GCCGGACGCC CGGAACTGGC GGAAAAGGAA GAGGCAGAAA TCACCGTTCT CAAGCAATTC
ATGCCCGCAG AGCTTACAGC AGAAGAAACG GCGGCCATTC TGGAAACCGT GATGAAGGAA
ACGGGAGCCT CTGCCAAAAA AGATATGGGG CAGGTCATGA AACTCATGCA GGAACGCACT
GCCGGCAGAG TCAACGGCAA GGAGTTGGCC CGCATGGTGT CAGCCAGACT GTCATGA
 
Protein sequence
MRLVNGDMNT ISDQIMEGMK TAMKAKDSVT LNTLRALKTA LTNTAIAKGG LGTRLEEAEE 
LAVVRKQIKQ REDSAEQFRA AGRPELAEKE EAEITVLKQF MPAELTAEET AAILETVMKE
TGASAKKDMG QVMKLMQERT AGRVNGKELA RMVSARLS