| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0044 |
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| Symbol | |
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| ID | 6275152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 61593 |
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| End bp | 62417 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642612086 |
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| Product | Diaminopimelate epimerase |
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| Protein accession | YP_001876672 |
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| Protein GI | 187734560 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.315608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGCTTC ACTTCTACAA GATGACGGGT GCCGGCAACG ACTTTGTCAT GGTGGACAAT
CGTGACCTGA GCCTCTCCTC CGTGCTGGAC AGAGAAACCA TAGAAGCCCT GTGTGACCGC
CGCTTCGGCA TTGGGGCTGA CGGGTTGATC GCCGTGGAAC CTTCCCAGGG CAAGGGGGGA
ATTGTTCGTA TGCGTTATTA CAATGCGGAC GGCGGAGAAG CGGAAATGTG CGGCAATGGC
GCCCGCTGCT TCGGCAACTT TGCCGCCGCC CTGCTTCATC ACGACAAGAC AGCCCCCCTT
CCTTTTGAAA CCATGGCCGG CGTCGTCACC GCAACCTTTG AAAAAGACGG CAACGTCACC
GTAAACCTGA CCAATCCCCA CTCCATGCAG CTCTTCGTGC TGAATGCCGA TCCGACTGTG
GGGGCAGATG TCCATTTCCT GAACACGGGC GTCCCCCATG CCGTTGCGTT TCTGGACAAG
CTGGAGGGCC TGGACATTTC CAGGCTGGGA GCCTATCTGC GTTACCATGA GGCCTTTTCA
CCCAAAGGCA CCAATGCCAA CTTCGCCAGA ATCCTGTCTC CGGGGCACAT TGCCATACGT
ACTTACGAAC GCGGCGTAGA GGATGAAACG CTTGCCTGCG GAACGGGAAT GACCGCCTGT
GCGCTGCTGC ATGCCGTATT GACGGACGCC CCCTCCCCCA TTCAGGTGGA CGTGGCGGGC
GGAGACACGC TTAAAGTCGG ATTCCAACGC ACAGGGGACC GTTTCACTGA CGTCACGCTG
ACCGGACCGG CAGACCTTGT GTTCACCGGA GACATTCAGA TCTAA
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| Protein sequence | MLLHFYKMTG AGNDFVMVDN RDLSLSSVLD RETIEALCDR RFGIGADGLI AVEPSQGKGG
IVRMRYYNAD GGEAEMCGNG ARCFGNFAAA LLHHDKTAPL PFETMAGVVT ATFEKDGNVT
VNLTNPHSMQ LFVLNADPTV GADVHFLNTG VPHAVAFLDK LEGLDISRLG AYLRYHEAFS
PKGTNANFAR ILSPGHIAIR TYERGVEDET LACGTGMTAC ALLHAVLTDA PSPIQVDVAG
GDTLKVGFQR TGDRFTDVTL TGPADLVFTG DIQI
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