| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0008 |
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| Symbol | |
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| ID | 6275239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 9710 |
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| End bp | 10681 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642612048 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_001876636 |
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| Protein GI | 187734524 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTGA CTACGGACGA CGCCGACGGG AAAATCCGCC TGGATCAATA CCTTGCCGCC
CACCTTCCGG AGCTTTCCCG CTCCAGGATC CAGAGCCTGA TCAAAAGCGG TGACGTGTTG
GTCAACGGCT CTCCCGCCAA GCCTAAAAAC CCCGTCTCCC GCGGTGATTC CATCACCGTC
CGCATTCCGG AACCGGAACC GGCGGAAGCC CAGCCTCAGG ATATCCCCCT GGACATCCTG
TATGAAGATG AAGACGTGGT AGTCATCAAC AAGGAAAGCG GCATGGTCGT GCATCCCGCG
GCCGGCAACC CGGACGGCAC CATCGTAAAC GCCCTGCTCC ACCACTGCGG GGACCTCTCC
GGCATCGGCG GAGTGGAACG CCCGGGCATC GTCCACCGCC TGGACAAGGA CACCTCCGGC
TGCCTGGTCA TCGCAAAAAA TGACGGCGCC CACCAGTCCC TGACGGCGCA GTTCGCGGCC
CGAAGCACGG AAAAGCGTTA TCTGGCCGTC GTCCAGGGTA TTCCTTCCCA AAGTTCCGGC
ACGGTCTTCA CCCATATCGG CCGCCATCCC GTCAATCGCC TGAAAATGGC AGTAGTCAAT
CCCGGTTCCG GGAAAGCCGC CATTACGGAC TACGATTTGC TCTGCGCAGA CCCGTCCACG
GACTCCTCCC TGGTTCTGTG CACGCTGCAC ACGGGCAGAA CCCACCAGAT ACGCGTGCAC
ATGCTCTATC TGGGCCATCC GCTCATCGGG GATCCCATTT ACGCCAAACC CGCCCGGCAA
AAGGCAAAAC CCGGCAGGCT CATGCTCCAC GCGTGGCGGC TGGGCTTCGA CCACCCGCGC
ACGGGAAAGC GCATGGATTT CGAAGCGCCC GTCCCGCCGG AATACACGCC GTGGCTCCAG
CTCTTCCCCA ACGGGCTTTA CGGGGCCATC CCGGAGCTGC GCCCGGTACA GGAAGACGGA
GGACGGAACT AA
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| Protein sequence | MNLTTDDADG KIRLDQYLAA HLPELSRSRI QSLIKSGDVL VNGSPAKPKN PVSRGDSITV
RIPEPEPAEA QPQDIPLDIL YEDEDVVVIN KESGMVVHPA AGNPDGTIVN ALLHHCGDLS
GIGGVERPGI VHRLDKDTSG CLVIAKNDGA HQSLTAQFAA RSTEKRYLAV VQGIPSQSSG
TVFTHIGRHP VNRLKMAVVN PGSGKAAITD YDLLCADPST DSSLVLCTLH TGRTHQIRVH
MLYLGHPLIG DPIYAKPARQ KAKPGRLMLH AWRLGFDHPR TGKRMDFEAP VPPEYTPWLQ
LFPNGLYGAI PELRPVQEDG GRN
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