| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Emin_1428 |
|---|
| Symbol | |
|---|
| ID | 6262937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Elusimicrobium minutum Pei191 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010644 |
|---|
| Strand | - |
|---|
| Start bp | 1520107 |
|---|
| End bp | 1523919 |
|---|
| Gene Length | 3813 bp |
|---|
| Protein Length | 1270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642611908 |
|---|
| Product | DNA-directed RNA polymerase, beta subunit |
|---|
| Protein accession | YP_001876314 |
|---|
| Protein GI | 187251832 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
|---|
| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.894677 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAA CAAACTTTGG TCAAATTTCA TCTAAATTGT CCTTGCCCGA TTTATTGGAT
ATGCAAAAAG AGTCTTTTGT TGACTTTTTG CAGCTTGACG TTGCCCCGAC AAAGAGAGAA
CTTAAAGGCT TACAAGCCGC GTTTGAAGAC GTGTTCCCCA TAGAAGCTCC GGACGGCAGC
ATGAAACTTG AGTTCGTTAA ATACGAGCTC GGCGCTCCCA GATATTCCAC GCCGCAGCAG
GCGGCTTTAA GGGACGGCAC TTACAGCGCT CCCATGAAAG CGGTAATGAG GCTTTCAGTT
AAAAAAAGAG ACGGGAAACT TAAAGAAGCT TCCGAGCAGG ATGTTACGCT TTGTGATCTT
CCTTTAATGA CGGATGCGGG CTGCTTTGTT TTTAACGGCG CTGAACGCGT TGTAGTCAGC
CAGTTGCACC GTTCACCCGG TATTATTTTT GAAGAAGACG AAGAAAAGAA ACAGTCTACT
TTAGGTAAAA AGCTTTATGT CGCGCGCATT ATTCCTTACA GAGGCGCGTG GATAGAATTT
TCATTTGATA TTATGAACGC GTTATGGGTA CGCATTGATC GTAAGAAAAA GGTGCTTGCC
ACCACGTTCT TACGCGCTTG TGGCTTAGAA ACAAACGCCC AGATAATACA GGCCTTTTAC
GACGTTGAGG ATGTTGAAGT CAAACCCGCT GAAATTGATA ACGTCGTGGG CCGTTACGCA
GCTGATGATA TCGTTGACCC CGCCACGGGT GAAGTGCTTT GGAATCTTGA CGACAAAGCC
GCTATGCCTA TGGACGACAA AATTTTTAAA GAAATGGTTG AACGCAAAAT TAAAAAAGTT
AAAATTATTT CCGGCAACCC CAGACAGGAC GATCCCGGTA TTTTAGCCAC ATTAGAAAAC
CGAAAAGACC AAATCAGAAC ATCAAAAGAA GCCCAAGCCG ACATCTATAA AAAGATGAGA
GGGCAGGACT TTGTAGTTAA AGAACAGGCC GAAGCATTTT TGGATAATCT TATTTTTGAT
AATATCAGAA GATATGATTT GAGCTATGTA GGCCGCTATA AAATCAATAA AAAGTTCGCT
TCTTTGTTTG ACATTGTTGA AAACCTTAAA TTTAAAAAAT TCACAAAACC TACAGATAAA
CGCAGAACAC TTTCCGCCGA GGATATTATA GTAACAGTTA AATATCTTTT AGCTTTAAAC
GCCGGCGAAG ACGCGCAAAA AATGTACGGT GAAGAAATTA TTTTTAAAAC CGACGATATT
GACCATTTGG GCAATAGACG TGTAAGAGGC ATCGGCGAAT TGTTGGAAAA CCAAATCCGT
GTAGGCCTTT CACAAATGGC TAAAACAGCC CGCGACAGAA TGAACAAGGA ATTAGCCTCT
CATACGCCGC GCGCTTTAGT TAACGCCCAG CCCGTTCAGG CTATTATAAA GAAGTTTTTT
GGTACATCAC AGCTTTCACA GTTTATGGAC CAGATTAATC CTTTATCAGA ACTTACGCAT
AAACGCAGAC TTTCAGCCTT AGGTCCCGGT GGTTTGAACA GAAAGAGAGC GGGCTTTGAA
GTCCGCGACG TTCACCACAC GCATTACGGC CGCGTTTGCC CCATTGAAAC GCCCGAAGGT
CCGAACATCG GTCTTATCAC GTCATTAGCG TGCTATTCTA AAGTTAACAA ATACGGTCTT
ATTGAAACCC CGTACAGAAA GGTTAACTCA GGCAAAGTAA CGGATAATTT TGAATACTTA
ACAGCCGACC AGGAAGACGA TTTAATGGTA GCGCAGTCAA ACACTCCTCT TACGGATAGC
GGCAAAATCA ATACAGATAT GGTTTCTTGC CGTGTAAGAA GCGACTATCC TATAGTTTCT
CCTTCAGAGG TCGACTATAT GGACGTTTCC CCGTTACAGG TTATCAGCGT TTCAGCGGCT
TTAATTCCTT TCCTTGAACA TGACGACGCT AACCGCGCTC TCATGGGTTG TAACATGCAA
CGCCAGGGCG TTCCTTTGTT GTTAACGGAA GCTCCTTTGG TGGGCACAGG TATCGAGCAT
GAAGTAGCGC GCGATTCCGG CGCCACGATT TCCGCCGCTA AACCCGGCAG AGTTGTTTTT
GCCGCGGCCG ATAAAATCGC TGTTGAACCT TTAGAAGGCG GCGCTCCGGA GATTTACGAC
CTTATTAAAT ACAAACGTTC CAACCAGGAT ACCTGTATTA ACCAAAGACC TTTAGTTAAA
GCCGGCGATA TTGTTAAAAA AGGCACGGTT TTGGCCGACG GCCCCGCCAT GAAAGACGGC
TTTTTGGCTT TAGGCAAAAA TCTGCTAGTC GGTTTTATGA GCTGGGAAGG TTATAACTAT
GAAGACGCTA TTTTAGTTTC CCATAAGCTC GTTAAGGAAG ACGTTTTTAC CTCAGTGCAT
TTGCACGAAT TTAGCATAGA CGCCAGAAAC ACAAAACTCG GCGCCGAAGA AATAACAAGA
GATATCCCCA ATATAGGCGC GGAAGCATTG GCGCATCTTG ACGCGGACGG TATTGTTATT
CCTTCCACGG TAGTTGAACC GGGTGATATT TTAGTCGGTA AAGTTACACC TAAGGGCGAA
CAGCAGCTTA CGCCTGAAGA AAGGCTTTTA AAAGTAATAT TCGGCAAAAA AGCCGACGAC
GTTGTTGACG CTTCTTTACG CGTACCTCCG GGCACAAGCG GCAAAGTAAT CGGCACAAGA
GTATTTGTAA GAAAAGAAAA ACTTACAAAA GCCGAAGAAA AAGCCAGAAT CAAAGCTTTG
GAAGATGAAA AAACAACGAA TCTTGAAACG TTAAAAGAAC AACGCAAGCT CGCTCTTACC
AACATTAAAG ATTCTAACGT TAAAGACGCT AAAAAAGAAG AAGAAAGAAT TAACGCTCTT
TACAAAAAAC TTGAAAAGAG AGTTTTGGAA GATTTTGAAA GAGAAATGGA ATTCTCCAAA
CAAGGTGACG AGCTTGCCGT AACGGTTAAC AAATCCGTAA AAGTTTTTAT TGCCAGCAAA
CGCAAGTTAA TGGTTGGCGA CAAACTTTCC GGACGCCACG GTAACAAAGG TGTTGTAGCT
AAAATTTTAC CGGAAGAAGA TATGCCTTTC CTTCCGGACG GCACCCCTTT AGATATCGTT
CTTTCACCTT TAGGTATTCC TTCTCGTATG AACGTGGGCC AGTTGTTTGA AACAATGTTA
GGCTGGGCGG CCAAGAACTT GGGTTATAAT GCCGCGACGC CTGTATTTGA TGGCCCTACC
GAAGAAACGG TCAGAGAAGA AATTAAAAAA GCTAAAAAAG CACTTATAGA AAAAGGCGTG
CCCGAAAAGC ACTTGCCCGA TGACTACTGC CGTATAACAT TATACGACGG CAGAACCGGA
CAGCCTTTTG AGGAAAAAGT GACCATAGGT TACATGTATA TCATGAAGCT TATCCACTTG
GTTGAAGATA AAGTTCACGC GCGTTCCACC GGGCCTTACA GCTTAATCAC AAGACAGCCT
TTAGGCGGTA AAGCACAATT CGGCGGACAG AGATTCGGCG AAATGGAAGT ATGGGCCATT
GAAGGTTACG GCGCTACATA CACATTGCAA GAATTTCTTA CCGTTAAGTC CGACGACTTT
ACAGGCAGAA CGAAAATGTA TGAATCTATC GTCCGCGGTG AGGCGCCGCA GCAACCCGGC
GTGCCGGAAT CCTTTAAAGT TTTAGTTAAA GAATTACAGG CGCTCGGTTT AAGCGTTGAG
CTTCTTAAGG ACAACCAGGG CCAGGCGGTT GAAGAAATGA CCGTAGCCTC TATAGCTAAG
GAAATTGTTT CTGAAGAAAC GGAGAATTTA TAA
|
|---|
| Protein sequence | MKQTNFGQIS SKLSLPDLLD MQKESFVDFL QLDVAPTKRE LKGLQAAFED VFPIEAPDGS
MKLEFVKYEL GAPRYSTPQQ AALRDGTYSA PMKAVMRLSV KKRDGKLKEA SEQDVTLCDL
PLMTDAGCFV FNGAERVVVS QLHRSPGIIF EEDEEKKQST LGKKLYVARI IPYRGAWIEF
SFDIMNALWV RIDRKKKVLA TTFLRACGLE TNAQIIQAFY DVEDVEVKPA EIDNVVGRYA
ADDIVDPATG EVLWNLDDKA AMPMDDKIFK EMVERKIKKV KIISGNPRQD DPGILATLEN
RKDQIRTSKE AQADIYKKMR GQDFVVKEQA EAFLDNLIFD NIRRYDLSYV GRYKINKKFA
SLFDIVENLK FKKFTKPTDK RRTLSAEDII VTVKYLLALN AGEDAQKMYG EEIIFKTDDI
DHLGNRRVRG IGELLENQIR VGLSQMAKTA RDRMNKELAS HTPRALVNAQ PVQAIIKKFF
GTSQLSQFMD QINPLSELTH KRRLSALGPG GLNRKRAGFE VRDVHHTHYG RVCPIETPEG
PNIGLITSLA CYSKVNKYGL IETPYRKVNS GKVTDNFEYL TADQEDDLMV AQSNTPLTDS
GKINTDMVSC RVRSDYPIVS PSEVDYMDVS PLQVISVSAA LIPFLEHDDA NRALMGCNMQ
RQGVPLLLTE APLVGTGIEH EVARDSGATI SAAKPGRVVF AAADKIAVEP LEGGAPEIYD
LIKYKRSNQD TCINQRPLVK AGDIVKKGTV LADGPAMKDG FLALGKNLLV GFMSWEGYNY
EDAILVSHKL VKEDVFTSVH LHEFSIDARN TKLGAEEITR DIPNIGAEAL AHLDADGIVI
PSTVVEPGDI LVGKVTPKGE QQLTPEERLL KVIFGKKADD VVDASLRVPP GTSGKVIGTR
VFVRKEKLTK AEEKARIKAL EDEKTTNLET LKEQRKLALT NIKDSNVKDA KKEEERINAL
YKKLEKRVLE DFEREMEFSK QGDELAVTVN KSVKVFIASK RKLMVGDKLS GRHGNKGVVA
KILPEEDMPF LPDGTPLDIV LSPLGIPSRM NVGQLFETML GWAAKNLGYN AATPVFDGPT
EETVREEIKK AKKALIEKGV PEKHLPDDYC RITLYDGRTG QPFEEKVTIG YMYIMKLIHL
VEDKVHARST GPYSLITRQP LGGKAQFGGQ RFGEMEVWAI EGYGATYTLQ EFLTVKSDDF
TGRTKMYESI VRGEAPQQPG VPESFKVLVK ELQALGLSVE LLKDNQGQAV EEMTVASIAK
EIVSEETENL
|
|---|
| |