Gene Emin_1371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1371 
Symbol 
ID6263206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1472975 
End bp1473499 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content40% 
IMG OID642611852 
Producthypothetical protein 
Protein accessionYP_001876258 
Protein GI187251776 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAA ATATAAAAAA AGGATTTACC TTAATAGAAC TTTTGGTGGT AGTTCTTATT 
ATAGGTATTT TGGCCGCCAT AGCTTTACCC CAATATCAAA AAACTGCGGA CAAGTCACGC
CTGATAGGCC TGCTGCCTTT ATGTAAAGCT ATTAAAGACG CCGAGGAAAG GTATTTTCTT
ATGACGGGGG AGTACACCTT GGATTTTGAT AATTTAGACG TTGAAATGCC CTCCGGAAGC
AGTTCCTCCA CAACAAGCCG CCGCTCATAT TCCAACGGTG ATTATTTTAA CTTAGTGGCC
GACACGCCAA GCACTACTTG GGCGGTTTAC GGACGCAACT CAAAAGTGCT TAAGGATTTT
TTATTAAGAG TAACCTTAGA TAACGGAAAA AGCAACGGCA AAATATATTG TTACGCCTAT
AATGAAAATA AAAGGGCGCA CGGGGTATGC AAATCTTTGG GTGGTAAATT ATCAAGCACA
GGGTGCAGTT CAACGGGACC TTGCAGTTAT TATCAAATAT TATAA
 
Protein sequence
MKANIKKGFT LIELLVVVLI IGILAAIALP QYQKTADKSR LIGLLPLCKA IKDAEERYFL 
MTGEYTLDFD NLDVEMPSGS SSSTTSRRSY SNGDYFNLVA DTPSTTWAVY GRNSKVLKDF
LLRVTLDNGK SNGKIYCYAY NENKRAHGVC KSLGGKLSST GCSSTGPCSY YQIL