Gene Emin_1286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1286 
Symbol 
ID6263724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1385266 
End bp1388490 
Gene Length3225 bp 
Protein Length1074 aa 
Translation table11 
GC content42% 
IMG OID642611765 
ProductUvrD/REP helicase 
Protein accessionYP_001876173 
Protein GI187251691 
COG category[L] Replication, recombination and repair 
COG ID[COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 
TIGRFAM ID[TIGR02785] recombination helicase AddA, Firmicutes type 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones92 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAA TTACAGATCT GCAAACCCGT TACGAAGCCT CCACCGTTAC TGACCGCAAC 
ATTGTTGTTG AGGCGGGTGC GGGCACAGGT AAAACCACGC TTTTAATAAG CCGCCTTTGC
TATTTAATGA TTGTAAAAAA CATTTCGGTT GAACGTATTG TGGCGCTTAC TTTTACCGAA
AAAGCCGCCG CCGAAATTAA AATACGTTTA TCCGCACAGC TTCAAAAAAT TATTAAAGAA
TGTTTATCCG TAACGCAAAA AGACAAAATC ACGCTTGAAC TTTTGGCCCA TTTATCTAAA
GAAGAAATTA TTATCCGCGC GCAGCGCGTG CTGGAATTTT TGGAACGCGG TTTTATAAGC
ACCATACACG GTTTTTGTTC ATATATTTTA AAAGCGTACC CTGTGGAAGC GGGCATATCG
CCTTCCGCAG TTGTTGACGA AGGACAGAGA AGGGAAACCG TTTTTAAAAG GCTTTGGAAC
AAATGGCTTG AGGAAGAACT TGGCGGCGGC GGGCCTAAAG AAGAAATTTG GAAACGTGTT
TTAAAAGAAA TAAATTTAGA AGACCTTTAT AATTACGCTT TTGATATGGC GGGCGGTAAA
ATAGACGCCT ACCACCCCAT GTCGCACGCT AAAGTTTTAA GCGGCGTTTG TTTTGAAAAC
GCCAAAATAG CGGAGCAAAT GTCTTGCGTT TTTCTTCCAC CCGGCGGTAA AAGCCGCAAG
ATTGAACGGG CGCTTGCTTC GGCCTCAATT ATTTTGCAGG AAGCGGCTTT CGCATTTAAG
GAGGGCAAAT TCCAAAAAAC GGAAAATCCC GGGCCTGAAA AACTTTCCTC CTCCGACCAG
GCCAAAGGAT GGGATGATGA AAATTTTGAA ACTGCGGTAC GCATAGTTGA TTTTGCAAGA
AGTTTATATC CGGACAGACA AATGCTTATA GCCGATGCTT TTAGCCTTGT TTCCCCTTTT
GTTAATAATG CCAGAGATAC TTTTGAGGCG CAGGGGCTTA TATCTTTTGA CGACCTTCTT
GTTAAAACAA GAACGCTTCT TAAAAATAAT TTAATTGTAA GAAGCGCGCT TAAAAAACAG
TTTGAAATAA TTTTTATAGA TGAATTCCAA GACACTGACC CTGTACAGGG TGAATTGCTT
TTATTTTTAG CGGAAGAGGA AAAATCCGCC GCCAAAGTTT GGAATGAAAT TAAACTTGCT
CCCGGCAAGC TGTTTGTGGT GGGCGACCCC AAACAATCTA TCTATCGTTT TAGAGGGGCG
GATATCACGG CTTACCAGTT GTTTACGGAG CTTATTTTAA AACAGGGCGG CATGATTTGT
TATCTGCAAA CTAACTTTAG AAGCGATGCC CAAATAATAG ATTTTGTTAA CTGCGCCGGG
TTTAAATTAA TTGAGGAGCG CCCCGGCTTC CAGGCTAAAT ATGTCCCAAT AAACGCTAAA
GATGGCGCGC CTTGCGATAA AGACGCGGTT AAAGACGTTA TTATATCTTC AGAACAACCG
CAAAGCGCGG ATGATTACCG CCATAACCAG GCTGAATTCA CGGCAAAATG GATAGCCGAG
AACGCGGGCA AATTAAAACT TTCAAACGGT TCCGTTTTGC AATATAAAGA CATTGCCGTG
CTTATGCGCA CCTCAAACGC TTTTAATATT TTTACCGAAG CGCTTAAAAG ATACGGCGTA
AAATACACTG TTGAGGAAGA TAAAAATTTT TATACCGCCC AGGAAATTAC GGATATTTTA
AACCTGCTCT CTCTTTTAGA CAACCCATAT GACAAAAACG CTTTAGCGGG CGTTTTAAGA
AGTCCGTTCG GCGGGTTCAA TGATGATGAA ATTTACCAAA TTTTTAAACA AAAATTTACG
GATATAAGCG CAAAAAAACT GCCCAAGGGT TTCGAACGGC TTGGCGGTTT TTATAAAACG
TTAAATACGC TTAAAGGTTT TGTGGGGCGT ATAAGCACGG GCGCTTTGGT TGAAAAAATA
CTTTCAAGCA CAATGTTTGC GGAGCTTTCG CAATTAGCCT ATAACGGTGA GCAAACTATA
TCAAATTTAC AAAAATTTGC CGCGCTTGCC GCAGGCGACC AGAACGAAAA CGCTAACAGC
CTAGGCCAGT TTTTGGCAAA TTCTAAAGAC CTGGCAAGGC AGGCAAGGGG TGAAGGGGAA
AGCCCGCTCG CTGACGAATT TTTAAGTGCT GTAAGCGTAA TGACAATACA TAAATCAAAG
GGTTTGGAAT TTCCCGTGGT TTTCCTGGCT GATATGTTTA GGCAAGAAAG CGTTAAACAG
AATAAATATT CTTATTCATG GTTTTATGAT ATGCACGGCT TAAGAGCCGG CCCGTACGCG
GACGCCAACT TGGCGTTTTT AGAAGTGCAG CAGCTTTGGC ACAGCAAAAG TGAAGAGGCC
AGGATTTTAT ACGTGGCGCT TACAAGAGCT AAGGAAAAAC TTTTTATTTT AGGCAATAAT
ACGGAAACAA AAAAAACGCC CGCCAGACAT TTACGAAACG CGGGCCTTTG GCCCGAGCTT
GTTACCGTAA AAGAACTGCC TAATGACAAA CTTACGCATC CTTTACAGTT AGAATATTTC
CCGTATGCGG AGCCGGATCA ATTTATTTAT AAAATAAATT TTACGCCTGA AGACGGCGGA
GTTTTAAAAA ACGCAGGCGA ATGGTTTAAC CGCTGGGCAA AACGAAGCGA AATTTATGAA
AAAATAAAGG AAGAGGCGCT GTTTATTTCA CCCAGTTCTT TAAATAAGCA TGAGGCTGTT
TTTGCTGGCT CTTCCGATAA TGCGGCGCTG CTTGGCACGC TGTGCCATAA AATGTTGGAA
AACTATGATT TTAAAACCGT TATAACGCCC GAACAAACGG CCGCTTCCGC GGCATCTTTG
CAAATTGAAG ATAATGATAT TATTAAAGAA GCGGCGGAAA TAATAAATAA TTTTACCGTT
TCGGAAGTTT GCAAAAAGCT TGCTTCTATG CGCGTGCTCG CAAGGGAAAT GCCTTTTACT
TATTTTGAGG AAGGCAAAAT AATAAGCGGT ACGGTGGATG TAATAGTTGA GCAAGAAGGC
GAAATTTTTG TTTTAGATTA TAAAACCGAT AAAACGCCTG ACCCTTCCAA ATACGCCTTG
CAGCTTGGCG CTTATAAAAG AGCTGTTAAA AAGATAATGG GAAATGAAGG CGTAAAAAGC
GGTTTGGTGT TTTTAAGAAC TTCACAACTT TATATAATAA AGTAA
 
Protein sequence
MTKITDLQTR YEASTVTDRN IVVEAGAGTG KTTLLISRLC YLMIVKNISV ERIVALTFTE 
KAAAEIKIRL SAQLQKIIKE CLSVTQKDKI TLELLAHLSK EEIIIRAQRV LEFLERGFIS
TIHGFCSYIL KAYPVEAGIS PSAVVDEGQR RETVFKRLWN KWLEEELGGG GPKEEIWKRV
LKEINLEDLY NYAFDMAGGK IDAYHPMSHA KVLSGVCFEN AKIAEQMSCV FLPPGGKSRK
IERALASASI ILQEAAFAFK EGKFQKTENP GPEKLSSSDQ AKGWDDENFE TAVRIVDFAR
SLYPDRQMLI ADAFSLVSPF VNNARDTFEA QGLISFDDLL VKTRTLLKNN LIVRSALKKQ
FEIIFIDEFQ DTDPVQGELL LFLAEEEKSA AKVWNEIKLA PGKLFVVGDP KQSIYRFRGA
DITAYQLFTE LILKQGGMIC YLQTNFRSDA QIIDFVNCAG FKLIEERPGF QAKYVPINAK
DGAPCDKDAV KDVIISSEQP QSADDYRHNQ AEFTAKWIAE NAGKLKLSNG SVLQYKDIAV
LMRTSNAFNI FTEALKRYGV KYTVEEDKNF YTAQEITDIL NLLSLLDNPY DKNALAGVLR
SPFGGFNDDE IYQIFKQKFT DISAKKLPKG FERLGGFYKT LNTLKGFVGR ISTGALVEKI
LSSTMFAELS QLAYNGEQTI SNLQKFAALA AGDQNENANS LGQFLANSKD LARQARGEGE
SPLADEFLSA VSVMTIHKSK GLEFPVVFLA DMFRQESVKQ NKYSYSWFYD MHGLRAGPYA
DANLAFLEVQ QLWHSKSEEA RILYVALTRA KEKLFILGNN TETKKTPARH LRNAGLWPEL
VTVKELPNDK LTHPLQLEYF PYAEPDQFIY KINFTPEDGG VLKNAGEWFN RWAKRSEIYE
KIKEEALFIS PSSLNKHEAV FAGSSDNAAL LGTLCHKMLE NYDFKTVITP EQTAASAASL
QIEDNDIIKE AAEIINNFTV SEVCKKLASM RVLAREMPFT YFEEGKIISG TVDVIVEQEG
EIFVLDYKTD KTPDPSKYAL QLGAYKRAVK KIMGNEGVKS GLVFLRTSQL YIIK