Gene Emin_1206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1206 
Symbol 
ID6263326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1302595 
End bp1304823 
Gene Length2229 bp 
Protein Length742 aa 
Translation table11 
GC content43% 
IMG OID642611684 
Producttype II secretion system protein E 
Protein accessionYP_001876093 
Protein GI187251611 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4962] Flp pilus assembly protein, ATPase CpaF
[COG4963] Flp pilus assembly protein, ATPase CpaE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00140506 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000000153533 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAGAAC TATCGGGCAG AACAGAAGGT AAAGTAATCG CTTTTTCAGG GCCTAAAGAA 
GGTGCCGGAA GGACTACTTT GCTTCTTAAT TTAGCTGTTT TGTGGGCGGG CATGCAAAAA
CGTCCGGTAC TGATAGTTCC TTTAGATCCT TTGGCAAGAC AAGAGCATAC TTTTTATTTA
GATATTAAAA CCCCGGTAAC TGCTGCGGAT ATAGTTAAAA GCTTAGGCGC AACCACAATA
GCTGTTGCGG GCGGGCTTTT ACGTGGTAAA ATATCGATGT CACAATACGG CGTGGGCGTG
ATGCCGCTTG GCAATACAAG AGGCCAGGTG TCTGCTATGA GCCCTAGGAT ATTAATGCCT
ATTTTAGCGC GCCTTTCCCA GACTTTTGAC ATTTTTTTAG ATATAGACTC ATCTTTCCCC
ATGCAGTCAT TTGCCTTTGA CATCGCGGAT AAAGTTTTTT GGATAACCCA GGCTACAAGA
AACCATTTAA ATACAACTGT TAAGATGTTT AACGAATATA AGGAAATGAG TTTTCCTATG
GAACGTCTTG ACGTTGTTTG TAATATGTAT GATATGCCCG GCTCTATAGC GCATGAGGAA
GTTGACAGAT TTTTTAAAAG TTTGGGAAAA GACGTTTCAG TTTTTTTACC GTGGGACGAC
AGCGTTATGG CGGCCTCAAA CAGGCGTGAG ATTGAAGCGG TTTCAAACCC CCATTCAGAC
TGGGTTAGCG AAGGTCTTAG AATTTTGATT CACAGGATTG AAACGGTAAC GCCTTCCATA
AGAGATTGGA TGAGCAGCGT CTCCGATGAA GATTTTACCG AAGCTTCCAG AGAGATATGG
ACGGCTCTTG TAGGCGGCGG CGCGGGGGGC GGCGGCGCGG TTCCCAAATT TAACCATGAG
GCTACTGCGG AAGAAGAAGC CAGAATGTCT TTTTGGGATG AGCTTAAACA AAGAGTGCAT
AAAGAAGTTA TTAAAGCTTT GGAACTTGAA AGAATTGTTA TAAGCGATGA GTCTAACAGC
GAGCAAACCA GAAAAAGAGT GGGGGAAATT ATTGAGGAAA TTTTGCAAAA GCAGCCTAAT
TTGCAATTTT CAAGGGAGCA GCGCGTAAGG TTCGCCACGG AACTTTTAGA TGAAATTTTG
GGTTTAGGGC CTTTAGAAGG TTTGATGAGA GACCCTAGCG TTACAGAAAT TATGGTTAAC
TCTTTTGATA AGATTTTTAT TGAACAAAAG GGTAAATTAA CTTTAACAAA ATACAGATTC
AGAAATAATG ACCAGGTTGT GCAGGTTATT AAAAGAATTG TTGCCCCGTT GGGAAGACGT
ATAGACGAAT CTGTGCCCTT AGTTGACGCG CGTTTAAAAG ACGGGTCGCG TGTTAACGCA
ATTATAGCTC CATTGGCGGT TTCGGGCCCT TCGCTTACTA TAAGAAGATT CTCGCAAAAA
CCTTTTGGCC CGGAAGATTA TTACAGATTT GGCACCATCA GCCGCGAGTG TATGGACTTT
TTAAAAGAGT GTGTAAAAAT CAGGAAAAAT ATTATTATTT CCGGCGGTAC CGGTACCGGT
AAAACCACAT TTTTAAACGC TCTTTCCACT TATATTCCTT CGGACGAACG TATTATTACC
GTGGAAGATA CCGCTGAATT ACGCTTGCAG CAGGTACACT GGATTTCCTT GGAAAGCAGG
CCGGCCAACA TTGAAGGAAA AGGTGAAATT ACTATTCAGG ATTTGGTTAA AAACTGTCTG
CGTATGAGAC CTGACCGTAT TGTAGTAGGC GAGTGCCGCG GCAAAGAAGC GTTGGATATG
TTGCAGGCTA TGAACACCGG CCACGACGGT TCTTTGGCCA CAATCCACGC CAATAACCCT
AAAGACGGTC TTACTCGTTT GGAAGCCATG TGTATGATGG GCAGCGCCGA TTTGCCTATT
TGGGCTATTA GGGAAATGGT GTCATCGGCG GTTAATATGA TAGTCCAGCT TTCAAGATTT
TCGGACGGGT CGAGAAAAGT TACTTATATT ACGGAAATCC TGGGGCAAAA AGACGGGATT
ATTCACACCA ACGATTTATT CAGATACAGA CAAACAAGTA TTGATGAAGA AACAGGTAAG
GTGCAAGGTC ATTTTGCCGC TACCGGTAAC AAACCGTCTT TTTATGATGA TTTTAAATCA
AAAGGCATTA ATATTGACGA GAGTGTTTTT GCCGCGCCTA ATACTCCCGC GCCGCCAAAG
GTTAACTGA
 
Protein sequence
MSELSGRTEG KVIAFSGPKE GAGRTTLLLN LAVLWAGMQK RPVLIVPLDP LARQEHTFYL 
DIKTPVTAAD IVKSLGATTI AVAGGLLRGK ISMSQYGVGV MPLGNTRGQV SAMSPRILMP
ILARLSQTFD IFLDIDSSFP MQSFAFDIAD KVFWITQATR NHLNTTVKMF NEYKEMSFPM
ERLDVVCNMY DMPGSIAHEE VDRFFKSLGK DVSVFLPWDD SVMAASNRRE IEAVSNPHSD
WVSEGLRILI HRIETVTPSI RDWMSSVSDE DFTEASREIW TALVGGGAGG GGAVPKFNHE
ATAEEEARMS FWDELKQRVH KEVIKALELE RIVISDESNS EQTRKRVGEI IEEILQKQPN
LQFSREQRVR FATELLDEIL GLGPLEGLMR DPSVTEIMVN SFDKIFIEQK GKLTLTKYRF
RNNDQVVQVI KRIVAPLGRR IDESVPLVDA RLKDGSRVNA IIAPLAVSGP SLTIRRFSQK
PFGPEDYYRF GTISRECMDF LKECVKIRKN IIISGGTGTG KTTFLNALST YIPSDERIIT
VEDTAELRLQ QVHWISLESR PANIEGKGEI TIQDLVKNCL RMRPDRIVVG ECRGKEALDM
LQAMNTGHDG SLATIHANNP KDGLTRLEAM CMMGSADLPI WAIREMVSSA VNMIVQLSRF
SDGSRKVTYI TEILGQKDGI IHTNDLFRYR QTSIDEETGK VQGHFAATGN KPSFYDDFKS
KGINIDESVF AAPNTPAPPK VN