Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Emin_1206 |
Symbol | |
ID | 6263326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Elusimicrobium minutum Pei191 |
Kingdom | Bacteria |
Replicon accession | NC_010644 |
Strand | - |
Start bp | 1302595 |
End bp | 1304823 |
Gene Length | 2229 bp |
Protein Length | 742 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642611684 |
Product | type II secretion system protein E |
Protein accession | YP_001876093 |
Protein GI | 187251611 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF [COG4963] Flp pilus assembly protein, ATPase CpaE |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00140506 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000000000153533 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCAGAAC TATCGGGCAG AACAGAAGGT AAAGTAATCG CTTTTTCAGG GCCTAAAGAA GGTGCCGGAA GGACTACTTT GCTTCTTAAT TTAGCTGTTT TGTGGGCGGG CATGCAAAAA CGTCCGGTAC TGATAGTTCC TTTAGATCCT TTGGCAAGAC AAGAGCATAC TTTTTATTTA GATATTAAAA CCCCGGTAAC TGCTGCGGAT ATAGTTAAAA GCTTAGGCGC AACCACAATA GCTGTTGCGG GCGGGCTTTT ACGTGGTAAA ATATCGATGT CACAATACGG CGTGGGCGTG ATGCCGCTTG GCAATACAAG AGGCCAGGTG TCTGCTATGA GCCCTAGGAT ATTAATGCCT ATTTTAGCGC GCCTTTCCCA GACTTTTGAC ATTTTTTTAG ATATAGACTC ATCTTTCCCC ATGCAGTCAT TTGCCTTTGA CATCGCGGAT AAAGTTTTTT GGATAACCCA GGCTACAAGA AACCATTTAA ATACAACTGT TAAGATGTTT AACGAATATA AGGAAATGAG TTTTCCTATG GAACGTCTTG ACGTTGTTTG TAATATGTAT GATATGCCCG GCTCTATAGC GCATGAGGAA GTTGACAGAT TTTTTAAAAG TTTGGGAAAA GACGTTTCAG TTTTTTTACC GTGGGACGAC AGCGTTATGG CGGCCTCAAA CAGGCGTGAG ATTGAAGCGG TTTCAAACCC CCATTCAGAC TGGGTTAGCG AAGGTCTTAG AATTTTGATT CACAGGATTG AAACGGTAAC GCCTTCCATA AGAGATTGGA TGAGCAGCGT CTCCGATGAA GATTTTACCG AAGCTTCCAG AGAGATATGG ACGGCTCTTG TAGGCGGCGG CGCGGGGGGC GGCGGCGCGG TTCCCAAATT TAACCATGAG GCTACTGCGG AAGAAGAAGC CAGAATGTCT TTTTGGGATG AGCTTAAACA AAGAGTGCAT AAAGAAGTTA TTAAAGCTTT GGAACTTGAA AGAATTGTTA TAAGCGATGA GTCTAACAGC GAGCAAACCA GAAAAAGAGT GGGGGAAATT ATTGAGGAAA TTTTGCAAAA GCAGCCTAAT TTGCAATTTT CAAGGGAGCA GCGCGTAAGG TTCGCCACGG AACTTTTAGA TGAAATTTTG GGTTTAGGGC CTTTAGAAGG TTTGATGAGA GACCCTAGCG TTACAGAAAT TATGGTTAAC TCTTTTGATA AGATTTTTAT TGAACAAAAG GGTAAATTAA CTTTAACAAA ATACAGATTC AGAAATAATG ACCAGGTTGT GCAGGTTATT AAAAGAATTG TTGCCCCGTT GGGAAGACGT ATAGACGAAT CTGTGCCCTT AGTTGACGCG CGTTTAAAAG ACGGGTCGCG TGTTAACGCA ATTATAGCTC CATTGGCGGT TTCGGGCCCT TCGCTTACTA TAAGAAGATT CTCGCAAAAA CCTTTTGGCC CGGAAGATTA TTACAGATTT GGCACCATCA GCCGCGAGTG TATGGACTTT TTAAAAGAGT GTGTAAAAAT CAGGAAAAAT ATTATTATTT CCGGCGGTAC CGGTACCGGT AAAACCACAT TTTTAAACGC TCTTTCCACT TATATTCCTT CGGACGAACG TATTATTACC GTGGAAGATA CCGCTGAATT ACGCTTGCAG CAGGTACACT GGATTTCCTT GGAAAGCAGG CCGGCCAACA TTGAAGGAAA AGGTGAAATT ACTATTCAGG ATTTGGTTAA AAACTGTCTG CGTATGAGAC CTGACCGTAT TGTAGTAGGC GAGTGCCGCG GCAAAGAAGC GTTGGATATG TTGCAGGCTA TGAACACCGG CCACGACGGT TCTTTGGCCA CAATCCACGC CAATAACCCT AAAGACGGTC TTACTCGTTT GGAAGCCATG TGTATGATGG GCAGCGCCGA TTTGCCTATT TGGGCTATTA GGGAAATGGT GTCATCGGCG GTTAATATGA TAGTCCAGCT TTCAAGATTT TCGGACGGGT CGAGAAAAGT TACTTATATT ACGGAAATCC TGGGGCAAAA AGACGGGATT ATTCACACCA ACGATTTATT CAGATACAGA CAAACAAGTA TTGATGAAGA AACAGGTAAG GTGCAAGGTC ATTTTGCCGC TACCGGTAAC AAACCGTCTT TTTATGATGA TTTTAAATCA AAAGGCATTA ATATTGACGA GAGTGTTTTT GCCGCGCCTA ATACTCCCGC GCCGCCAAAG GTTAACTGA
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Protein sequence | MSELSGRTEG KVIAFSGPKE GAGRTTLLLN LAVLWAGMQK RPVLIVPLDP LARQEHTFYL DIKTPVTAAD IVKSLGATTI AVAGGLLRGK ISMSQYGVGV MPLGNTRGQV SAMSPRILMP ILARLSQTFD IFLDIDSSFP MQSFAFDIAD KVFWITQATR NHLNTTVKMF NEYKEMSFPM ERLDVVCNMY DMPGSIAHEE VDRFFKSLGK DVSVFLPWDD SVMAASNRRE IEAVSNPHSD WVSEGLRILI HRIETVTPSI RDWMSSVSDE DFTEASREIW TALVGGGAGG GGAVPKFNHE ATAEEEARMS FWDELKQRVH KEVIKALELE RIVISDESNS EQTRKRVGEI IEEILQKQPN LQFSREQRVR FATELLDEIL GLGPLEGLMR DPSVTEIMVN SFDKIFIEQK GKLTLTKYRF RNNDQVVQVI KRIVAPLGRR IDESVPLVDA RLKDGSRVNA IIAPLAVSGP SLTIRRFSQK PFGPEDYYRF GTISRECMDF LKECVKIRKN IIISGGTGTG KTTFLNALST YIPSDERIIT VEDTAELRLQ QVHWISLESR PANIEGKGEI TIQDLVKNCL RMRPDRIVVG ECRGKEALDM LQAMNTGHDG SLATIHANNP KDGLTRLEAM CMMGSADLPI WAIREMVSSA VNMIVQLSRF SDGSRKVTYI TEILGQKDGI IHTNDLFRYR QTSIDEETGK VQGHFAATGN KPSFYDDFKS KGINIDESVF AAPNTPAPPK VN
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