Gene Emin_1177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1177 
Symbol 
ID6263019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1274253 
End bp1275536 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content41% 
IMG OID642611655 
Productouter membrane efflux protein 
Protein accessionYP_001876064 
Protein GI187251582 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATT TTAAAAAAAT TATATTTATG GTTTTTATTT TCGTTCCCGC CTCTTACATA 
CTGGCGGCAA CGCCTACTGA TGAGGTTAAG ATACCAGTCT ATACTTTGGA CTACTGCATC
CAAAGAGCGT TAGACAACAA CCCTTCGTTA GGCGCCGCGT CAAGCAATTT AATAGGCGCG
AAAGCAAGGG TTTGGCAGTC GGGCGCCGTA TTCTGGCCGC AAATAAGCGC AAACGGTTCC
TGGAGCAGGA GCAGAACAGA AGTTATGGAT GATATTTTTA GTTATTCAAA CAAATCTTCA
GCCGGATTAA GCGCTAGCAT GAACATATTT TCTTTCGGTA AAAATTATTT AACTTTCCGC
GCGCAGCAAT TAAATTACAC AAGCGCCGGT TTTGACTACC AAACAACTTT AAACCAAATG
GTTTTCGATG TAACAGAAGC TTACTATAAC CTTGTTTATG CTATTATAAG CGTTGATGTT
TTTAAAACTT CCGTGCAGCG TTTTGAACAA CAGCTGGCTC AGGCGCAAAG TTTTTTTAAC
GTAGGCATAA GGCCTAAAAT AGACGTTACA AACGCTGAGG TTAATTTAAA CAACGCTAAA
CTTAATCTGA TAAGAGCGCA AAACTCGGTA AGAACGGCTT ATGCTGTATT AAACAATTTA
ATGGGCCTGC AAAAAGTTGA GTTTTACGAT GTTGATAAAG ATTTAACTTT TGAAAAATAT
TTTATCAGCC CGGAAGACGC TCTTTCAAAC GCTTATAAAA ACAGGCCGGA CTTAGCTTCC
GCTGTCGCTA AAACGGATAG CGCAAAAGCT ACTTTAAACG CTGCCAGGGC GGAATATTTT
CCCGACATTA ACGCCACCGC TTCATACGGG GCAAGCGGCG CAAACAGCCT TTCTACGGAA
AACGGCTCGG TCGGGATAAA TGCAAGCTGG GCTTTATTTA CAGGTTTAAA AACCACTAAA
AAAGCTCAGG AGGCCAAAGC GTCTTACTCC ACAAGCGTTT ATAACCAGGA ATCCGTAAGA
CAGCAAATTA TAAAAGAACT TACACAAGCT TACGCTAATT TAACGCAATC GGAAGAAGCT
ATTCCCGTAG CCGGATTAAA CGTTGAAAAA GCCAGAGAAA ACCTTGCTCT TGCAAACGGC
CGTTATAAAG TCGGCGTCGG CAACAGCATT GAAGTAAAAG ACGCGGAATA CTCTTTTAGC
GAAGCAGAAC TCAGCTACGC GCAGGCTTTA ACCGAATACA GAATAGCTAA AGCAAATATT
TTAAAATCCA TGGGAATGAG ATAA
 
Protein sequence
MSNFKKIIFM VFIFVPASYI LAATPTDEVK IPVYTLDYCI QRALDNNPSL GAASSNLIGA 
KARVWQSGAV FWPQISANGS WSRSRTEVMD DIFSYSNKSS AGLSASMNIF SFGKNYLTFR
AQQLNYTSAG FDYQTTLNQM VFDVTEAYYN LVYAIISVDV FKTSVQRFEQ QLAQAQSFFN
VGIRPKIDVT NAEVNLNNAK LNLIRAQNSV RTAYAVLNNL MGLQKVEFYD VDKDLTFEKY
FISPEDALSN AYKNRPDLAS AVAKTDSAKA TLNAARAEYF PDINATASYG ASGANSLSTE
NGSVGINASW ALFTGLKTTK KAQEAKASYS TSVYNQESVR QQIIKELTQA YANLTQSEEA
IPVAGLNVEK ARENLALANG RYKVGVGNSI EVKDAEYSFS EAELSYAQAL TEYRIAKANI
LKSMGMR