| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Emin_1086 |
|---|
| Symbol | |
|---|
| ID | 6263441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Elusimicrobium minutum Pei191 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010644 |
|---|
| Strand | - |
|---|
| Start bp | 1177206 |
|---|
| End bp | 1178408 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642611566 |
|---|
| Product | HK97 family phage major capsid protein |
|---|
| Protein accession | YP_001875975 |
|---|
| Protein GI | 187251493 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4653] Predicted phage phi-C31 gp36 major capsid-like protein |
|---|
| TIGRFAM ID | [TIGR01554] phage major capsid protein, HK97 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 99 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAAA TAATGCAATC CATAAAAGAA TTAAGAAAAA CTTTAGAAAC TAAAATCGAT
TCATGCATTA CTAAAGAAAA GGCTGAAAAC ATAGTTTCTG ATTTAGTAAA AAAAGTTCAC
CCCGAACAAA GAAAGGCTTT ACTTCCTACC TCGGCGGACG ATGTTCTGGA ACGTTTTGCC
GAATTTTCAA AATCCTCAAA ACACGCGCCT GAAAAACCTT GGACAAGCGA TTACGGCAGA
AAGTTTGGCA ACATGAAAAA CTTTCTTTTA GCGGCTAAAG ACAGGCACGC TTCTTTCGCG
GACAGCAAAT CAGTTTTAGC CGAATCAGGC GCTGGCGGCG GCGGATATCT TGTTCCCACG
GAATTTTCAA ACCATGTTGC CCGTATAATG GCCGATATTT CACCCATTAT GCAAATTGCC
AACGTTGTGC CCATGGGCTC TTGGAAAAGG CAAATACCTA AGCAGATTTC TAATTTAAGC
GTAGGCTGGG TTGCCGAGAA CGGTGTAAGG GGCATTAATA ACCCCGCGTT TGGGCAAATT
GAACAGGTAG CAAAAGTAAT GGCAACAGTT ATCAAATGCA CGGACGAGCT TATAAGAGAC
AGCGCCATTA ATTTAACGCA GTTCTTATCC GAGCTTGTGG CTGAAGCCAT GGCATTGGAA
GTTGAAAGAG TTTCCTTAGT TGGCGACACG GCCGCCGGCG ATCCTTTTAA CGGCGTTTAT
AACACGGCAG GATTACAAAA TGTAACAATG GGCGGGCAAA ACGTTTCTTT TGATGATATT
GCTAACTTAA TTTTTCAACT AAACGATGCT AACGCCGCAG GCAGTGTTTT GGTCCTTTCC
CGCACCGGTC TTAGCAAACT TTTAAAATTA AAAGACTCTA ACGGCAATTA TTTGTGGCAG
CCCCCCGCGG GCGGCGCTCC GGCTACAATT TGGAACACTC CTTATGTCGT AAGCTCTAAA
ATACCTAATG ATGTCGACGG TGATAAAACG ATAGCTCTTT TCGGACGTTT TAATAAACAC
CTTCTTATCT CACCCAGACA GGAAATGGCG GTAAAAGTTT CACAGGACGC CTCTTCATGG
AACGCGGCTT CCGAAACGGC CGACTCCGCA TTTATGTTAG ACCAAACCTG GCTGCGTTTT
ACTCAGGCAC TTTCAATAGA CGTTACATTC GGAAGCGCCT TTAGCTGCCT TAAATTCAAA
TAA
|
|---|
| Protein sequence | MDEIMQSIKE LRKTLETKID SCITKEKAEN IVSDLVKKVH PEQRKALLPT SADDVLERFA
EFSKSSKHAP EKPWTSDYGR KFGNMKNFLL AAKDRHASFA DSKSVLAESG AGGGGYLVPT
EFSNHVARIM ADISPIMQIA NVVPMGSWKR QIPKQISNLS VGWVAENGVR GINNPAFGQI
EQVAKVMATV IKCTDELIRD SAINLTQFLS ELVAEAMALE VERVSLVGDT AAGDPFNGVY
NTAGLQNVTM GGQNVSFDDI ANLIFQLNDA NAAGSVLVLS RTGLSKLLKL KDSNGNYLWQ
PPAGGAPATI WNTPYVVSSK IPNDVDGDKT IALFGRFNKH LLISPRQEMA VKVSQDASSW
NAASETADSA FMLDQTWLRF TQALSIDVTF GSAFSCLKFK
|
|---|
| |