Gene Emin_1058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1058 
Symbol 
ID6263064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1152315 
End bp1152845 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content38% 
IMG OID642611538 
ProductTfp pilus assembly protein major pilin PilA-like protein 
Protein accessionYP_001875948 
Protein GI187251466 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4969] Tfp pilus assembly protein, major pilin PilA 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.110537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones96 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAACA GAAATATGTT TTTTTGTTCT ATCTTTCGAA TTAAAAATAA AGGCTTTACG 
CTTATAGAGT TGCTTGTAGT TGTTTTAATT ATAGGTATAT TGGCTGCTAT TGCGCTGCCG
CAATACCAAA AAACTGTAAG GAAATCGCGC ACGGCGGAAG TTCTTACATT GGGCAGAGCG
TTGCGTGATT CAATGAACAG AACGTTGCTG CAGGACCCGG TTGCTTTTGA TAATTTTGAC
TATATCCCCG AACAATATTT AGAATTGCTA GATGTGCAAT TTCCCTATCC GCTAATTGAC
GGAGGTACAC GCCAAGTATT TAAAAATTTT TATGAGATTG AATTTTCGCC GGAAGATATT
TCCTTTTCTA TACAATGGGA TGAATTGGGA AATAAAATTA GATTTACAAA TAATAAAGCC
GCGTCTCCGG GGGCTATATA TTGTTATTCC AGATATCAAC ACTCCGTGTC GTTTTGTACA
ATGTTGGGCG GCAAAAATTG CGCGGTAGGA GCGGAATGCA GAATAGACTA A
 
Protein sequence
MLNRNMFFCS IFRIKNKGFT LIELLVVVLI IGILAAIALP QYQKTVRKSR TAEVLTLGRA 
LRDSMNRTLL QDPVAFDNFD YIPEQYLELL DVQFPYPLID GGTRQVFKNF YEIEFSPEDI
SFSIQWDELG NKIRFTNNKA ASPGAIYCYS RYQHSVSFCT MLGGKNCAVG AECRID