Gene Emin_1015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1015 
Symbol 
ID6263152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1107574 
End bp1108398 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content45% 
IMG OID642611495 
Productdiaminopimelate epimerase 
Protein accessionYP_001875905 
Protein GI187251423 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0253] Diaminopimelate epimerase 
TIGRFAM ID[TIGR00652] diaminopimelate epimerase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTTG TTAAATACCA GGGTTTGGGC AACGATTTTA TTCTTATTGA CTGTGTTAAA 
ATTAAAATTG ACGGTTTAAA CGCGCTTGGA AAAAAACTGT GCGACAGGCA TTTCGGAATA
GGGGCTGACG GGCTTATAGC CGTGTTTCCT TCCGCTTCGG CAGATTATAA AATAAGAATT
ATTAACTCTG ACGGGACCGA GCCTGAAATG TGCGGCAACG GCATACGCTG CGCCATGCGT
TTTGTTTTTG ATTATATTAA ACCTCAGCGT AAGCTTACCT TTGAAACGCT TGCCGGGCCG
ATAAAAACAG AACTTCTGGC AGAAAATCTT GTTAAAGTTG ATATGGGCGC GCCAAAGCTT
ACCGCTGCGC AAATACCTTT AAATATAAGT GATTCAGATG GCAGAGCGGT AGATATCCCT
GTTAAGCTTG AAGGTGGGAA AATAAAAGGC ACCGGCGTAT CCATGGGCAA CCCCCATTTT
GTTATTTTTG TTGAGGATAT AAAGAAAACC GATGTCGCCA AAACAGGTAA AGAGGTTGAG
AACAACACCG CTTTCCCGCA AAAAACGAAT GTTGAGTTTG TGCAGGTTAT TACGCCTTCG
CGCCTTTGTA TGAAAGTTTG GGAGCGCGGT GTAGGCATTA CTTTAGCCTG CGGCACGGGC
GCCTGCGCCA GCTTGGTTGC CGGTGTTTTA AATAATAAAA CGGAAAGGCT TGCCTTAGTA
GAACTTGACG GCGGGCAGCT TACCGTTGAA TGGCCCGATG ACGGAGCCTC TGTTTTTATG
ACAGGCCCGG CGACGGAAGT TTTTAGCGGG GTTTTTAAAG AATAA
 
Protein sequence
MEFVKYQGLG NDFILIDCVK IKIDGLNALG KKLCDRHFGI GADGLIAVFP SASADYKIRI 
INSDGTEPEM CGNGIRCAMR FVFDYIKPQR KLTFETLAGP IKTELLAENL VKVDMGAPKL
TAAQIPLNIS DSDGRAVDIP VKLEGGKIKG TGVSMGNPHF VIFVEDIKKT DVAKTGKEVE
NNTAFPQKTN VEFVQVITPS RLCMKVWERG VGITLACGTG ACASLVAGVL NNKTERLALV
ELDGGQLTVE WPDDGASVFM TGPATEVFSG VFKE