Gene Emin_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1000 
Symbol 
ID6262823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1089863 
End bp1091071 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content45% 
IMG OID642611480 
Productaromatic hydrocarbon degradation membrane protein 
Protein accessionYP_001875890 
Protein GI187251408 
COG category[I] Lipid transport and metabolism 
COG ID[COG2067] Long-chain fatty acid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.768268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.00646641 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATTTA AAATATTAAA AAAAGCATTA TTATGTTTAA TGCCGTTTTG CTGTGGAATT 
TATTTAAACG CGGCGGGATT CGCGCTTTAT GAATTCAGCG CAAGGGGCAA CGCCATGGGC
GGCGCCGTAC TGGCAAACAA AGCGGAACCC GCCTCCATAG CTTCAAACCC CGCTCTTATC
ACACAATTAG AAGGTGCCCA AATACAAGCG GGCGTAACAG CCATTATAGT TGAAGGTTCA
ACCTCGTTAA ACAATGATAA AAGAGATTTA GAAACAGGCG TTTTTTACCT GCCGACCTTC
TATTTTACCA AGCAAATGAG AGAACATATA GTCTTAGGCG TGGGTTTCTT TTCACGCTTT
GGGCTTGGCG GCAAATATAA AGATTACGGC ACCTGGCTGC CCGCGATATC GGAAAGACAG
TCCTACAGAA TGGATTTGGT AACATACTCC TTTAACCCGG TTATGGCTTC CCAAGTAACG
GACGAGCTTT CTTTAGCAGG CGGTTTTGAA ATTATGTACG CCAGTTTAAC AGAGGAAAAA
GGCCCCGGCA ACGCAAACAG AATTGAAATT GAAGGTGATT CCATAACCTG GGGCGCTAAC
TTCGGCCTTC ATTATAAGCC CGAATGGGCT GATAAATGGG CCGCCGCCGT TACTTACCGC
ACAAAAACAA GACATTTGGC CAGCGGAAAG GTAACGGGAC ACGGTTTATA CAGCCCCGCC
ACGGGCGACG CTACCGCCGC GCTCGCTTTG CCTGATCAGC TAGCTTTCGG CCTTTCGTTT
ACACCTACAG AAAGGCTTAT TCTTGAAGCG GGCATCACCG GCGTGTTTTG GAGTTCTTAT
AAACAGCTTA AAATCGATTA TGACGATTTG TCAAAAGGAT CTTCAAACGA GTATAAGCAT
TATAGGGACG TTTTCCGCCT TTCTTCCGGC ATGGAATTTG CGGTAACAGA AAATTGGGAT
ATACGTTTTG GTTATGTATA TGACGAATCC CCCATTAACC CTGATTTTAT GGATACAATG
GTACCCGCGG ATGACAGGCA TATCTTCAGC ACGGGTTTAG GTTATAAAAG AAGCAACTGG
GGCGCGGATA TATCCTATTC TTATATGTAT GTAAAAGATT TATCCGGTAC TACGGAACAC
GGCACCCCCG CGAAATATGA AAACGCCCGA AGCCAAATGA TAGGCCTAAG TTTAAAGTAC
GCGTTTTAA
 
Protein sequence
MKFKILKKAL LCLMPFCCGI YLNAAGFALY EFSARGNAMG GAVLANKAEP ASIASNPALI 
TQLEGAQIQA GVTAIIVEGS TSLNNDKRDL ETGVFYLPTF YFTKQMREHI VLGVGFFSRF
GLGGKYKDYG TWLPAISERQ SYRMDLVTYS FNPVMASQVT DELSLAGGFE IMYASLTEEK
GPGNANRIEI EGDSITWGAN FGLHYKPEWA DKWAAAVTYR TKTRHLASGK VTGHGLYSPA
TGDATAALAL PDQLAFGLSF TPTERLILEA GITGVFWSSY KQLKIDYDDL SKGSSNEYKH
YRDVFRLSSG MEFAVTENWD IRFGYVYDES PINPDFMDTM VPADDRHIFS TGLGYKRSNW
GADISYSYMY VKDLSGTTEH GTPAKYENAR SQMIGLSLKY AF