Gene Emin_0802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0802 
Symbol 
ID6263383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp876393 
End bp876851 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content39% 
IMG OID642611279 
ProductTfp pilus assembly protein PilE-like protein 
Protein accessionYP_001875694 
Protein GI187251212 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.964553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.826959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG GCTTTACATT AATAGAGTTA TTGGTTGTTG TGCTTATTAT AGGCATACTT 
GCCGCTATCG CTTTGCCCCA ATATACTAAC ACGGTGGAAA AATCACGTAC GGCGGAAGCA
AAAATTGTTC TTAAGGCTAT GAAGGAAGCC CAGGAAAGAT ATTTTCTTAC AACCGGCGCT
TATACAACAG ATTGGGATGA TTTAGATTTA GAAAAACCTG TAAGCAAAAA CTGGAATTAC
GTTATAGCGG CTGATTTATC AGTTTACGCT GTAAGAAATA AAACCGCGCC GACATATTTA
CTTGCTTACA GATTTAACAA TCCCGTAGCG CGCGGAAGGG ATTCTATTAT CTGTCGTTCG
GATACTGATA CTGATTACGG CAGAAAAATA TGCAAAATGC TTGGAGCTGC TGAATATGTA
TCCGAGGGTG GTTATGAAAA TTGGGTTTTG CCTTTGTAA
 
Protein sequence
MKKGFTLIEL LVVVLIIGIL AAIALPQYTN TVEKSRTAEA KIVLKAMKEA QERYFLTTGA 
YTTDWDDLDL EKPVSKNWNY VIAADLSVYA VRNKTAPTYL LAYRFNNPVA RGRDSIICRS
DTDTDYGRKI CKMLGAAEYV SEGGYENWVL PL