Gene Emin_0730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0730 
Symbol 
ID6263051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp805717 
End bp806421 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content43% 
IMG OID642611204 
Productorotidine 5'-phosphate decarboxylase 
Protein accessionYP_001875622 
Protein GI187251140 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0284] Orotidine-5'-phosphate decarboxylase 
TIGRFAM ID[TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0000000744541 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACCTT ATGAAAAAAT AATTGTAGCG CTTGACGTTG ATACAGAAAA AAAAGCTTTA 
GCTTTAGTAA AAAAATTAAA AAATAAAGCG GGCGTGTTTA AAATAGGCAA AGAACTTTTT
ACCTCAGCGG GGCCGGGTAT TGTTAAAAAA GTACAAAAAC TTGGCGGCAA AGTATTTTTG
GACCTTAAGT TTCATGATAT TCCCAACACC GTTTATAAAG CCGTGGCTTC AGCCTCAAAA
TTAGGCGTGT ATATGATGAC AATTCACACA AGCGGCGGAA GTGAAATGAT GAAAGCCGCT
GTAAAGGCGG CGGAAGAAAA TTCCACAAAA AACAAACGCC CTATTATCTT AGGCGTTACG
ATTTTAACCA GTCTTGACGA TAATGCCCTT GACGAAATAG GATACAAACA AGGGGCCGAA
AAAATGGTTT TACACCTTGC TAAAATGGCA AAAAAAGCGG GAGTAACGGG CATAGTATCT
TCGCCAAAAG AACTTAAAAA ATTAAGAAAG GCCTTAGGCC CCGGCATGGT TTTGGTAACC
CCGGGCATAA GGCCCGTTTG GAGCGCCGCG GGCGACCAAA AACGCATTAC CACTCCAGCC
GACGCGGTTA AAAACGGCGC CAGCTTTATG GTAATAGGCC GCCCCATAAC AGGCGCTAAG
GACCCGGCCA AAGCCGCCCA AATGATTTCC GACGAAATTA AATAG
 
Protein sequence
MKPYEKIIVA LDVDTEKKAL ALVKKLKNKA GVFKIGKELF TSAGPGIVKK VQKLGGKVFL 
DLKFHDIPNT VYKAVASASK LGVYMMTIHT SGGSEMMKAA VKAAEENSTK NKRPIILGVT
ILTSLDDNAL DEIGYKQGAE KMVLHLAKMA KKAGVTGIVS SPKELKKLRK ALGPGMVLVT
PGIRPVWSAA GDQKRITTPA DAVKNGASFM VIGRPITGAK DPAKAAQMIS DEIK