| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Emin_0617 |
|---|
| Symbol | |
|---|
| ID | 6262816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Elusimicrobium minutum Pei191 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010644 |
|---|
| Strand | - |
|---|
| Start bp | 672691 |
|---|
| End bp | 673167 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 642611088 |
|---|
| Product | Tfp pilus assembly protein PilE-like protein |
|---|
| Protein accession | YP_001875509 |
|---|
| Protein GI | 187251027 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4968] Tfp pilus assembly protein PilE |
|---|
| TIGRFAM ID | [TIGR01710] general secretion pathway protein G
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.217435 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG GATTTACTTT AATAGAACTT TTAGTGGTTG TTCTAATTAT CGGTATACTT
GCCGCTATTG CGCTGCCGCA ATATACAAAA GCTGTTGACA GAGCCCGCGC CTCCGAAGCG
GTGTTGATAT TAAAAGCAAT GGTTGACGCG CAAGAAAGAT ATTATTTGGC AAACGGTTTT
TACGCTAAAA GTATTGATGA TTTAGACATA GATGTCCCCG CCACTACTAA AAACTTTACA
TTTGGTATTG AGTCGGGTAC CGGCAGATAC GTATCGGCCA CTCCGGTAAA GTTTAACGGA
TATAGTTTTG AATTTCATAC CGACCACGGC GCTCCTACAA CGCCTTTATA TCACGGCGCA
AGGTGGTGCC GCGCCACAAC AAGTAATGAA AAAGCAAAGT CAATGTGCCT TTCCATGGGC
GGCAAATTAT CTACAAGAAT AAGCCACGGC ACAACAACTT ACTATGATTT AAACTAA
|
|---|
| Protein sequence | MKKGFTLIEL LVVVLIIGIL AAIALPQYTK AVDRARASEA VLILKAMVDA QERYYLANGF
YAKSIDDLDI DVPATTKNFT FGIESGTGRY VSATPVKFNG YSFEFHTDHG APTTPLYHGA
RWCRATTSNE KAKSMCLSMG GKLSTRISHG TTTYYDLN
|
|---|
| |