Gene Emin_0613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0613 
Symbol 
ID6262810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp669833 
End bp670330 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content39% 
IMG OID642611084 
ProductType II secretory pathway pseudopilin PulG-like protein 
Protein accessionYP_001875505 
Protein GI187251023 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0934015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG GTTTTACCTT AATAGAGCTT TTGGTAGTAG TTTTAATAAT AGGTATTTTG 
GCGGCGATAG CTTTGCCCCA GTACCAAAAG TCCGTAGATA AAGCCCGTAT GTCCGAAGCT
ATGATGGTGC TCCGTTCAAT AAAAGACGCG TCGGACAGAT ATAAGCTGGC TAATGACGTG
CAGCCTACAA GTTTTGACGA TTTAGATATT GATATTTCGT TAGACTGCAC CGCGGATAAA
ACGCAATGCA GTACGACAAA CTTTCGTTAC GCATTTAATT CCGGCACATG CTTAACTTGT
ATGTACGCTT TTAGTAAAAA TAACTCGGGT TTCTTTCTTG AAAGAAATAC CACAACAAAT
AACTTTTGGT GTGCCGCTCC TATAACGGAT GGTTCTAAAA ACAGTGTTTG CAAATCAATA
AGCGGTACAA ACACTCCGCA CCATTCAGGC GCGTCTACAC ATTATTATCT TATATCAGGT
TCTGGAAATA ATAATTAA
 
Protein sequence
MKKGFTLIEL LVVVLIIGIL AAIALPQYQK SVDKARMSEA MMVLRSIKDA SDRYKLANDV 
QPTSFDDLDI DISLDCTADK TQCSTTNFRY AFNSGTCLTC MYAFSKNNSG FFLERNTTTN
NFWCAAPITD GSKNSVCKSI SGTNTPHHSG ASTHYYLISG SGNNN