| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Emin_0578 |
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| Symbol | |
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| ID | 6262745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Elusimicrobium minutum Pei191 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010644 |
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| Strand | + |
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| Start bp | 632290 |
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| End bp | 633873 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642611049 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_001875470 |
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| Protein GI | 187250988 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.000285943 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAGGA GTTTAATTGC TGTTTGGGCT TTTGCAGCGG CGCTTTGTTT GACAAGCGCA
AGTATAGCAT GGGCTCAAAA TGTTAATTTG GAGTTACCTA AGGATGAACC CGCCCCTAAA
TCCGGCGGTT TCGCCGCCGC TAATGCGGAG TCATCTCTGT ATAAAGATAC AGAGGCCAAC
TCACCGTTAG ACAGAAAAGT TTCTATCAGA GTGGCAAGCG TTCCGATAGC TACGTTTCTT
AACAGTATTT CAGCGCAGGC TAAAATAAAC TTTATTATGA GTGAGGAATT TGCCAATAAA
AAAGTTACAG CTTCACTTAA TAATATTACA GTGAGAGAGG CGCTTGACAC ATTACTTCGC
GTGCAGGGAC TTACTTACCA GCGTATAGGT AAAAGCGACA GCTATGTCGT TACCAAACGT
TCAAGTGATT CACCTAACAC AATTACAAAA GTTTATACAT TAAACTATAT TTCACTTCAA
GGCAGCAACA GCACCGGCAA TACAAACTCG CCACAATCAA CTTTTGCCTC CAGCCTTAAC
GTCAACCCCA ATGAACAAAG AAGCGACATG GAAAACCTTG CCGAAATGGT TACAGACAGC
GCGAGAAAAG GCGCCACCGG CAGCGATTTC TTAACAATCA TTCAAAGTGT AATGTCCTCA
CAGGGTAAAA TAGCTATTGA CCCGAGAACA AATAAACTTA TTGTTACCGA TATTCCTGAA
ATTTTTCCGC AGTTGGAAAA CATTTTAGCT GAACTTGATA TCAAACCTCC GCAGGTTTTG
ATTGAAGCGC AAATTATTGA AGTAAACAAA TCAAGCGGTT TGGAAATAGG TTTAAGCTAC
GGCGGTACGG ACGGCACAAT ATTTAAATTT ACAGGTCCCG CAAGAGGCGT TGATATTGAT
TATGTTAAAG GTAACGGCGT AAGCGGCTGG GGTTATATTT TCCCTCCCGC AGGTACGGGT
ACGGGCGGTA GCTCCGGCGG CGACAGCGGT GGTGGAAGCA CTGACGGCAG CGGCGGCAAC
AGCAACTCCC CTAAAGACGC TTTCTTAGAT TTTTCTTCAT TTTCAATCGT GCTTAAATCA
CTTTTGACAA GAGGCGAAGC AAAGTACCTT GGTAAGCCTA AAGTTGTTAC AATAAACAAC
CAACCCGCGG TTATCGAATC AACAAGAGAC GCGGCTGTGG GTTTCGCAAG TAATTTGTCA
GGCAACACAG GCAGCACAAA CGTTGTAAGC CAGACAGCTG AAAGAAAAAC TGTGGGTTTA
ACCCTTAAAG TTACGCCCCA GGTTAACAAA GAGGGGTATA TTACCCTTCT TATCGAACCT
TCTTATTCTT CAGTCGCAAA CTCTGCCGTA AGTGATGGTA CGAAAGATAC GCTTAACAGA
AGCGCAAGCA CTCTTGTACG CGTTAAAAAC GGACAGACAG TTGTATTGGG CGGCTTATTG
TCTTCAAGAG AAATCTTAGA AGACAGGAAA GTTCCTTTAC TTGGTGATAT TCCTTTAATA
GGTTGGTTAT TTACACAAAG ATCAACAACT AAAGAAACAA CCGATATGGT TATTTTTGTA
ACGCCTACAA TCTTGGCGGA CTAA
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| Protein sequence | MKRSLIAVWA FAAALCLTSA SIAWAQNVNL ELPKDEPAPK SGGFAAANAE SSLYKDTEAN
SPLDRKVSIR VASVPIATFL NSISAQAKIN FIMSEEFANK KVTASLNNIT VREALDTLLR
VQGLTYQRIG KSDSYVVTKR SSDSPNTITK VYTLNYISLQ GSNSTGNTNS PQSTFASSLN
VNPNEQRSDM ENLAEMVTDS ARKGATGSDF LTIIQSVMSS QGKIAIDPRT NKLIVTDIPE
IFPQLENILA ELDIKPPQVL IEAQIIEVNK SSGLEIGLSY GGTDGTIFKF TGPARGVDID
YVKGNGVSGW GYIFPPAGTG TGGSSGGDSG GGSTDGSGGN SNSPKDAFLD FSSFSIVLKS
LLTRGEAKYL GKPKVVTINN QPAVIESTRD AAVGFASNLS GNTGSTNVVS QTAERKTVGL
TLKVTPQVNK EGYITLLIEP SYSSVANSAV SDGTKDTLNR SASTLVRVKN GQTVVLGGLL
SSREILEDRK VPLLGDIPLI GWLFTQRSTT KETTDMVIFV TPTILAD
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