Gene Emin_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0548 
Symbol 
ID6262752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp600761 
End bp601270 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content40% 
IMG OID642611019 
Producthypothetical protein 
Protein accessionYP_001875440 
Protein GI187250958 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4969] Tfp pilus assembly protein, major pilin PilA 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG GGTTTACTTT AATAGAGTTG TTAGTAGTGG TTTTAATTAT AGGGATACTT 
GCGGCAATAG CTTTACCCCA ATATACGAGA AGTGTGGAAA AAGCGAAAGC GAGCCGAATA
CTTCCTATAA TGTCTTCTTT AAAGCAAGCT GTTAGAGTTT GTCTTATGGA AACAGGCGGC
GTACAGTGTG ATATTGATCA ACTAAATATT ACTATTAATA ACGCCAGCGG CACTCCTATC
ACCAGAGCTA ATGTTTCAAC AAGCAATCAA ACTCCTACTC CTATAAATAA CGAATGGGGT
ATAGCTTATA ATCATGCTTC AGGGGAAATT TTTCTTGTCC GTATTCCTTA CGCAGGCAAA
TTCTTTTGGG ATATTATTTT AAGCACAAAA GACGGCAGTT GCTATGTGCG CGGCAACACA
AGTCATCCCG ACGGTATGAA AGTGATAGAA AGTTTAGGTT TTACAAAAAG CGCCGGAACC
AGCGGCTGGA TAACTTACAG ATGCGACTGA
 
Protein sequence
MKKGFTLIEL LVVVLIIGIL AAIALPQYTR SVEKAKASRI LPIMSSLKQA VRVCLMETGG 
VQCDIDQLNI TINNASGTPI TRANVSTSNQ TPTPINNEWG IAYNHASGEI FLVRIPYAGK
FFWDIILSTK DGSCYVRGNT SHPDGMKVIE SLGFTKSAGT SGWITYRCD