Gene Emin_0455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0455 
Symbol 
ID6262595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp491392 
End bp492036 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content32% 
IMG OID642610926 
ProductXRE family transcriptional regulator 
Protein accessionYP_001875349 
Protein GI187250867 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0000000298649 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTATCG GAAAAAAAAT TCTACAAGCA AGACGAGAAC TTAATTTAAC GCAAAAAGAA 
CTTGCCCAAA AAATAGGTTT GCCAGGAAGT ACAATTGCGC GTTGGGAAAC GGATTCGTTT
AGCCCTTCCC CTAAAAATAT TGAAAAATTG TCTAAAGCTC TAGGCAGAGA ATATAAATAT
TTTTACGAAA CCCAAGAAGA TATATTTACC GTATTTAAAA AAGCAAAAGG TGAAATCCGC
GATAATGAAA ACATTTTTTC TTTTCATAGT GATGAAACGA AAAATGAAAT AAAATTCGCG
GGAGTCTTTA AAAAAGGCGC CGCTATATTT TTTGAAGATG ACGACATCTC TAACTCAAAA
AACAAAACTA TCCCGCCCCA AAAATTATTT TTTAACGTAA AGGACAATTC CCTTTCTCCC
GATTTTGAAA AAACTGATAC TTTAGAAATA ATTACAACAA AAGAAATTGA ACCCGAATAT
AATGGAAAAT ATTATATTGT TGAAATAAAA GATGAGCAGT TAATTTATAA ATGCACAGTT
TTAGGCAATG ATATAAATCT TTCCATAGCG GGCAAAACAA AACGCATCCC AAAAAATAAA
GTTGAAATTC TAGGCCGTGT GACTGCCGTA AAAAAACTTC TTTAA
 
Protein sequence
MSIGKKILQA RRELNLTQKE LAQKIGLPGS TIARWETDSF SPSPKNIEKL SKALGREYKY 
FYETQEDIFT VFKKAKGEIR DNENIFSFHS DETKNEIKFA GVFKKGAAIF FEDDDISNSK
NKTIPPQKLF FNVKDNSLSP DFEKTDTLEI ITTKEIEPEY NGKYYIVEIK DEQLIYKCTV
LGNDINLSIA GKTKRIPKNK VEILGRVTAV KKLL