Gene Emin_0422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0422 
Symbol 
ID6262472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp451379 
End bp451870 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content36% 
IMG OID642610890 
ProductTfp pilus assembly protein PilE-like protein 
Protein accessionYP_001875316 
Protein GI187250834 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.253002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG GTTTTACTCT TATTGAGCTT TTAGTGGTTG TATTAATTAT AGGCATTTTA 
GCGGCTATCG CCTTGCCACA ATACACAAGA GCAGTTGAAA AGACACGTGT TACAGGCCTT
TTTCCACTTG TAAGAGCTAT CGAACAGGCA CAAGTAAGAT ATCACCTTGC CACAGGCTCC
TACGCTAAGA CTTTTGATGA ACTTGATATT GAAATGCCTG CCGGAGGAAC AAAACTTACT
GACGCCAAAA TAGAATATAA TAATTTTTTA TGTTTTCTTA CTAATGCGCA ATCCTCATAC
AATTCGGTTT ATTGTAACAG CATAAAAACA AAAGTCCAGA TTGAAAAATA TTATAATGGG
CACTTTATTT GTTGGGCTGC CAACGGAGAT TTAAATGCAG AAAAAATTTG CCAATCAATT
ACCGGAAAAT CGGTAAAAGA CACAACATCT TCAGGGCAGG CATCTGGCTA TTTTATAGTA
AAAGCAAGTT AA
 
Protein sequence
MKKGFTLIEL LVVVLIIGIL AAIALPQYTR AVEKTRVTGL FPLVRAIEQA QVRYHLATGS 
YAKTFDELDI EMPAGGTKLT DAKIEYNNFL CFLTNAQSSY NSVYCNSIKT KVQIEKYYNG
HFICWAANGD LNAEKICQSI TGKSVKDTTS SGQASGYFIV KAS