Gene Emin_0383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0383 
Symbol 
ID6262509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp409031 
End bp409537 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content42% 
IMG OID642610849 
ProductTfp pilus assembly protein PilE-like protein 
Protein accessionYP_001875277 
Protein GI187250795 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00000000492385 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAGTAA ACTCCGCAAA AAAATCACTA AGTAAAACAA ATAAAGGTTT TACGTTAATT 
GAATTGTTAG TGGTAGTTTT GATAATAGGC ATACTTGCGG CTATTGCTTT GCCGCAATAT
ACCGTAGCGG TTGAAAAGGC CCGCGCCTCC GAAGCTATGC TTAACATTCG TTCTTTTTAT
GACGCGGGAC AAAGATATTT CCTTCAAACG GGAACTTACC CCACAACTTT TGACGTATTA
GATATTGAAC TTCCGTGCAC GGTAATCAGT TCCGGCAGTT GTGAAAATAA AAATATCACA
TACACCTTTG GTACAAGCAG CCCGTTTATT GGGGCGCACA GGCCGGGAAA ATGGTTTCTT
GAACGAAACT GGCAAACAGG CCTTTACTGG TGCGCCGCAA ACACAACTTA CGGACCTTCT
GCAAAAGTAT GTAAAACATT AACCGGCAAA TCAACAAAGC ACCACTCGCA CACCAGCGCT
CCTTATGACT ATTACTTGTT TGACTGA
 
Protein sequence
MSVNSAKKSL SKTNKGFTLI ELLVVVLIIG ILAAIALPQY TVAVEKARAS EAMLNIRSFY 
DAGQRYFLQT GTYPTTFDVL DIELPCTVIS SGSCENKNIT YTFGTSSPFI GAHRPGKWFL
ERNWQTGLYW CAANTTYGPS AKVCKTLTGK STKHHSHTSA PYDYYLFD