Gene Emin_0326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0326 
Symbol 
ID6263610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp347531 
End bp348640 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content42% 
IMG OID642610791 
Productalanine racemase 
Protein accessionYP_001875222 
Protein GI187250740 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0787] Alanine racemase 
TIGRFAM ID[TIGR00492] alanine racemase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.442092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.535526 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAA TTTTAAGGCC TACAGCCGCC GTGATTGACT TGGAAAATTT AAAACATAAT 
ATTAATTATG TTCGTTCCCT TTTAAACCCA AAAACAAAAA TGCTTTTTGT TTTAAAAGCA
AACGCTTACG GACACGGCGC AGTTAAGCTT GCTAAATACG CCCAGGAAAA TAATCTTTGC
GATATGCTTG GTACCGCTTC TGTGGAAGAA GGCGTTGAAC TTAGAGAAAA CGGAATAAAA
CTGCCTGTTC TGGTTTTGGG AAGCGTCTAT CCTTTTGAAG CTTTTGAAAC CGCCGCCGCT
TATGATTTGG CTATAACAAT AGCAAGTTTA TCCGCCGCCA AAGCCGTTTG TGAAATAGCT
TCTAAAATCA ATAAAACCGT TTACTGCCAT GTTAAGCAAG ATACCGGCAT GGGGCGCATA
GGCACAAGAC GTACCGGCGT AGCTAAAATA CTGCAAGAGC TTAAACAAAA TAAAAATATT
ATTATTGAGG GGTTGTACAC TCATTTATCT TCCACAGACA GCGACGAAGT TTTTACTTCT
TGCCAATTAG GTTATTTTGA AGAAGCCGCC CTTGCCGCAA AAGCTGATAA TATTGACGTA
GAAATATTTC ATGCCTGCGC TACCATGGGT ACGCTTTTCG CTCCGCGCGG CAGGTTTGAC
ATGGTGCGTT TGGGACTTGG CGCTTACGGC ATGGTAAAAG AGGATAAAAA TTTTAAACCT
GTTCTTTCTT TAAAATCAAA AATAGTGTTT GTTAAAGATG TTAAAAAAGA TTTCGCCATA
AGTTACAACC AAAGTTTTAT TGCGCCTAAA CAAATGCATA TAGCTACCGT GCCCGTAGGT
TACGGAGACG GGTATATGCG CGCCATGTCC GGCAAGGCGG AGGTTTTGAT TGCGGGCAAG
AGATGCAAGG TTATTGGCAA TATTACCATG GATATGATTA TGGTTGACGT CACTGACGTC
CAAGAGGCAA CCGTAGGCGA CGAAGTTGTT TTGATAGGTA AGCAGGGTGA TGAGGAAATT
ACCGCTTGGG AGCTTGCTTC CTGGGCAAAC ACCATAGCTT ATGAGATTAC CACACTTATA
ACCGCCAGAG TGCCTAGATT TTATAAATAA
 
Protein sequence
MDKILRPTAA VIDLENLKHN INYVRSLLNP KTKMLFVLKA NAYGHGAVKL AKYAQENNLC 
DMLGTASVEE GVELRENGIK LPVLVLGSVY PFEAFETAAA YDLAITIASL SAAKAVCEIA
SKINKTVYCH VKQDTGMGRI GTRRTGVAKI LQELKQNKNI IIEGLYTHLS STDSDEVFTS
CQLGYFEEAA LAAKADNIDV EIFHACATMG TLFAPRGRFD MVRLGLGAYG MVKEDKNFKP
VLSLKSKIVF VKDVKKDFAI SYNQSFIAPK QMHIATVPVG YGDGYMRAMS GKAEVLIAGK
RCKVIGNITM DMIMVDVTDV QEATVGDEVV LIGKQGDEEI TAWELASWAN TIAYEITTLI
TARVPRFYK