| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Emin_0225 |
|---|
| Symbol | |
|---|
| ID | 6262999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Elusimicrobium minutum Pei191 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010644 |
|---|
| Strand | + |
|---|
| Start bp | 241259 |
|---|
| End bp | 242995 |
|---|
| Gene Length | 1737 bp |
|---|
| Protein Length | 578 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 642610688 |
|---|
| Product | ATP-dependent OLD family endonuclease |
|---|
| Protein accession | YP_001875124 |
|---|
| Protein GI | 187250642 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.000140656 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTA AAAATGTCCA TATTCATAAC TTTAGGTCCA TACTAGATGC CGATTTCCCC
TTGGAATCAT ATTCCATACT TGCGGGAGAA AATAATTCAG GAAAGACAAC TTTTATTAAT
GCTTTACGAG TTTTTTATGA AGATATAAAA TTTAACAAGG CAGAAGACTT TCCTAAAATG
GAAACATCTG ATGTAGAGTC TTGGATAGAG GTTGAGTTCA TAACTGTACA AGAAGAGCAA
GACTTATTAA AAGAAGAATA TAGAAGTGCA GACAAGATAC TAAGGGTTAG AAAGTATCTA
GCATCCTCCT CTATAGAAAT AAAGTCAACT CAAAGTAATA TCTATGGGTA CGAAAATGGT
GTTTTGTCTA CCACGCTCTT CTATGGTGCT AAAAATATAT CCCAAGCAAA GTTGGGTAAT
ATTTTGTATA TCCCAGAGTT AAGTCGCACC GAAGAAGTTA TGAATTTATC AAAAGCAGCG
TCTCCATTAA AAAGCATTGT AGAATATGTT CTTGGTAAGA TATTAAAAGC AAGTTCTTCT
TTTTCTGAGC TAAATAAGGC CTTTGAGGTG TTTAACAAAG AATTCCAAGC AGAAAGTTCC
CCAGAGGGAT TATCTATTAA CAAAATGAAA GAGGATATAA ACTCTGAGCT TAAAGACTGG
GGTGTTAGTT TGGGTATAAA TATCAATGCG GTCTCTCCAG AAGTTATAAC AAAAAATCTC
CTCTCTCATT ATTTGCAGGA TTCTAAGCTG GGTGAACAGG AGATAAACAC AAGCAGTGTC
GGGCAAGGGC TTCAGAGACA CATTATTTAT TCTTTAATAA AAATAGCATC TAAATACCAA
GACCCTAAAG AAATTAAAAA GAAAGATTTT TCTCCAGATT TTACGCTCAT TTTATTTGAA
GAGCCTGAAG CCTTTTTACA TCCGTCGCAA CAACAGATTT TAAACATAGA TTTAGAGAGT
ATTGCTAAGG GAGATAATGA GCAAGTAATA GCAACTACAC ATTCCCCAAT ATTTGTTTCT
AAAAATATAA ACAATTTGCC CTCACTAATA AGATTGAGTA GGGAAGAGCG AAATAAATGG
GAAACCAAAA GTTTTAATAT TTCTAAAGAA AAACTGGAAT TATTGCTGTC AGATAATGCG
GGGCTTGAAG CCTGCTTCAA AAGCACTGTC GCCTTACCTG CTTGTCAAGA AGAACTGAAG
AAAGCTTTGG CAAAATCTCT GGCCTCGGGT ACATTGGAAG GTTTTTCTGG AAGTGATAAG
GAAATTATGA ATATTTGCAT GTGGCTTGAC ACAGAACGAG CAAATGCTTT TTTTTCAAAA
CATGTAATAA TATGTGAGGG GGCAACAGAA AAAGTTCTAT TAGAGTATTT ATTTGCAACG
CATTGGAAAG ATTTTGCTAA AAAACACATA TATTGTCTGG ATTCTTTAGG TAAGTTTAAC
ATACATAGAT TTATAAACTT ATTTGATTCC CTAGGAATAT ATCATTCTGT TGTTTATGAT
TCAGATAACA ATCGTGGTGT TCATGAAATA GTTAATAAAT TTATTCAGAG TAAAAAAAGT
GCGTACACAC AAAACCTGTT AGCCTTATCT GGCGATGTTG AGTCTGAATT TGGGATTACT
AAGCCAGCTA ATACGCATTT GAAACCTGCT AACTTATTGT TGCATTTAAT TAAAAATAAA
ATTACCCAGA AACAAATAGA CTCCTTTAAG GAGAAGTTTA ATTATCTTTC TATATAG
|
|---|
| Protein sequence | MKIKNVHIHN FRSILDADFP LESYSILAGE NNSGKTTFIN ALRVFYEDIK FNKAEDFPKM
ETSDVESWIE VEFITVQEEQ DLLKEEYRSA DKILRVRKYL ASSSIEIKST QSNIYGYENG
VLSTTLFYGA KNISQAKLGN ILYIPELSRT EEVMNLSKAA SPLKSIVEYV LGKILKASSS
FSELNKAFEV FNKEFQAESS PEGLSINKMK EDINSELKDW GVSLGININA VSPEVITKNL
LSHYLQDSKL GEQEINTSSV GQGLQRHIIY SLIKIASKYQ DPKEIKKKDF SPDFTLILFE
EPEAFLHPSQ QQILNIDLES IAKGDNEQVI ATTHSPIFVS KNINNLPSLI RLSREERNKW
ETKSFNISKE KLELLLSDNA GLEACFKSTV ALPACQEELK KALAKSLASG TLEGFSGSDK
EIMNICMWLD TERANAFFSK HVIICEGATE KVLLEYLFAT HWKDFAKKHI YCLDSLGKFN
IHRFINLFDS LGIYHSVVYD SDNNRGVHEI VNKFIQSKKS AYTQNLLALS GDVESEFGIT
KPANTHLKPA NLLLHLIKNK ITQKQIDSFK EKFNYLSI
|
|---|
| |