Gene Emin_0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0096 
Symbol 
ID6263695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp100987 
End bp101478 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content42% 
IMG OID642610558 
Producthypothetical protein 
Protein accessionYP_001874999 
Protein GI187250517 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.062594 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG GGTTTACGTT AATAGAACTT TTGGTTGTGG TTTTAATAAT AGGCATATTA 
GCCGCTATCG CCTTGCCACA ATACCAAATT GCGGTTGAAA AATCGCGCGC GTCGCAGGCT
TTTATTATGG TTAAAGCTAT AAAGGACGCG TCGGACCGAT ATCAACTGGC AACAGGGGAA
AAGCCAAAAA CGTTTGATGA TTTAGATATC GGAGTTCCAG GGGACAAATA CTCTTCCTCA
ACCACTGAAC CTTATGAAAA AATAAAAGAC AAAAATTACT ATTATGAGCT TTGGGACCAA
GGCCCCGCCG CCAGAAAAAT AACAGGCGAG CTTGTTATTG CCCACTATGA AAATATTCAT
TCAATAAAAA ACTCTTTCGC CTGCGCGGCC GCAACTTCTA ACGCAACGGC AAACAAAATT
TGCAAATCCT TCGGCAGTTC AACCCCGAAC GAAAGCAGTG CCAGCTGGAA TTACTATGCC
GTAAAAATTT AA
 
Protein sequence
MKKGFTLIEL LVVVLIIGIL AAIALPQYQI AVEKSRASQA FIMVKAIKDA SDRYQLATGE 
KPKTFDDLDI GVPGDKYSSS TTEPYEKIKD KNYYYELWDQ GPAARKITGE LVIAHYENIH
SIKNSFACAA ATSNATANKI CKSFGSSTPN ESSASWNYYA VKI