Gene Emin_0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0062 
SymbolthyX 
ID6263935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp68222 
End bp68908 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content42% 
IMG OID642610524 
ProductFAD-dependent thymidylate synthase 
Protein accessionYP_001874966 
Protein GI187250484 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1351] Predicted alternative thymidylate synthase 
TIGRFAM ID[TIGR02170] thymidylate synthase, flavin-dependent 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.00428445 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACACAGG AAATAGTTAA AGTTTTAGAT AAAGGTTTTG TTAAGCTTGT CGATTTTATG 
GGCGGGGATA TCCGCGTGGT AGCATCGGCG CGTGTTACTT TCGGTTCGGA AACCAAAGGC
CCGGAAAAAG ACAAAGCGCT TATAAAATAT TTATTGGAAA ACGCCCATCA TTCTCCTTTT
GAGCATACAA ATTTTCAGTT TAACGTGCGC TGCCCTATTT ATATAGCCAG ACAGTGGATG
AGGCACCGTT GGGGTTCTTA CAATGAAGTC AGCGCCAGAT ATACGGAAGT AAAGGACGAG
TTTTATATAC CTTCCGAATT CCGCATACAG GACACGCACA ATAAACAAGG TTCTCTTTCT
GGGGCGGATT TAAATAATGA AGAGCTTTTA AAAATTTACG AAGAAAGTGT TGAAGCTTCT
TATAAAGCTT ATAAAGCACT GTTGGAAAAA GGCGTGGCCA GAGAAATGGC AAGGGGCATT
TTGCCCGTAT GCCAATACAC ACAATTTTAT TGGACGGTAA ACGCGAGAAG CTTGCTTAAT
TTTCTTTCTT TGCGCACTGA TAAACACGCG CAGAAAGAAA TAAGGGATTA CGCGGACGCT
ATTGCCCAAA TCGTAGCGGA AAAAATGCCC TGGACCTGGG AAGCTTTTGT TAACATGAAC
AAAAAACTGG TGCCCAGCGC TAACTAG
 
Protein sequence
MTQEIVKVLD KGFVKLVDFM GGDIRVVASA RVTFGSETKG PEKDKALIKY LLENAHHSPF 
EHTNFQFNVR CPIYIARQWM RHRWGSYNEV SARYTEVKDE FYIPSEFRIQ DTHNKQGSLS
GADLNNEELL KIYEESVEAS YKAYKALLEK GVAREMARGI LPVCQYTQFY WTVNARSLLN
FLSLRTDKHA QKEIRDYADA IAQIVAEKMP WTWEAFVNMN KKLVPSAN