Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Emin_0062 |
Symbol | thyX |
ID | 6263935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Elusimicrobium minutum Pei191 |
Kingdom | Bacteria |
Replicon accession | NC_010644 |
Strand | + |
Start bp | 68222 |
End bp | 68908 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642610524 |
Product | FAD-dependent thymidylate synthase |
Protein accession | YP_001874966 |
Protein GI | 187250484 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1351] Predicted alternative thymidylate synthase |
TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.00428445 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACACAGG AAATAGTTAA AGTTTTAGAT AAAGGTTTTG TTAAGCTTGT CGATTTTATG GGCGGGGATA TCCGCGTGGT AGCATCGGCG CGTGTTACTT TCGGTTCGGA AACCAAAGGC CCGGAAAAAG ACAAAGCGCT TATAAAATAT TTATTGGAAA ACGCCCATCA TTCTCCTTTT GAGCATACAA ATTTTCAGTT TAACGTGCGC TGCCCTATTT ATATAGCCAG ACAGTGGATG AGGCACCGTT GGGGTTCTTA CAATGAAGTC AGCGCCAGAT ATACGGAAGT AAAGGACGAG TTTTATATAC CTTCCGAATT CCGCATACAG GACACGCACA ATAAACAAGG TTCTCTTTCT GGGGCGGATT TAAATAATGA AGAGCTTTTA AAAATTTACG AAGAAAGTGT TGAAGCTTCT TATAAAGCTT ATAAAGCACT GTTGGAAAAA GGCGTGGCCA GAGAAATGGC AAGGGGCATT TTGCCCGTAT GCCAATACAC ACAATTTTAT TGGACGGTAA ACGCGAGAAG CTTGCTTAAT TTTCTTTCTT TGCGCACTGA TAAACACGCG CAGAAAGAAA TAAGGGATTA CGCGGACGCT ATTGCCCAAA TCGTAGCGGA AAAAATGCCC TGGACCTGGG AAGCTTTTGT TAACATGAAC AAAAAACTGG TGCCCAGCGC TAACTAG
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Protein sequence | MTQEIVKVLD KGFVKLVDFM GGDIRVVASA RVTFGSETKG PEKDKALIKY LLENAHHSPF EHTNFQFNVR CPIYIARQWM RHRWGSYNEV SARYTEVKDE FYIPSEFRIQ DTHNKQGSLS GADLNNEELL KIYEESVEAS YKAYKALLEK GVAREMARGI LPVCQYTQFY WTVNARSLLN FLSLRTDKHA QKEIRDYADA IAQIVAEKMP WTWEAFVNMN KKLVPSAN
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