Gene Emin_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0056 
Symbol 
ID6263002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp63000 
End bp63704 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content34% 
IMG OID642610518 
Producthypothetical protein 
Protein accessionYP_001874960 
Protein GI187250478 
COG category[S] Function unknown 
COG ID[COG1478] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01916] F420-0:gamma-glutamyl ligase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.347627 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTA AACCCAAAAA AACAAGCGTT TTTAAAGAAG GGGATAATCT TTCTTTCTTT 
ATAAAAAAGC ATATAAAAAA AATAAAAGAA AACGGCGTTT TGGTAATATC CTCAAAAATA
GTCGCGCTTT CGGAAGGCCG TGTTTTGCCT CCTTTAACCG TTAAACAAAA AGAATCGCTT
ATAAAAAAAG AAAGCACTGG TTATATAAAA ACAAAACTTT GTTTTTTTAC TATTAAGGAC
GCAATGGTAA TGACAAACGC GGGAATTGAC GAATCAAATT CCGAAGGCGG CAAAATTATT
TTACTTCCTA AAGACTGTTA TAAAACAGCG TCTGAACTAG TAAAGGAACT TAAAAAATTT
TATAAAGTAA AAAACTTTGG CGTAATAATT ACCGATAGCA TGATACTTCC TTTAAGAGCG
GGCGTTATAG GCGCGGCGGT GGGTTACTCC GGTTTTAAAG GCGTAAAAAA TTATATTGGT
AAAAAAGATA TTTACGGACG CAAATTAAAA ATGACAATGG TTGATATCGC CGACAGCCTC
GCTTCCGCGG CAAGTTTGCT TATGGGCGAA GCAGACGAAA AAACGCCCCT TTGCGTTATA
GAAAACGCGC CCGTTGTTTT TTGCGCTAAA GATAAAAAAG GTGAAATAAA ATATCCTTTG
GAACAAGATT TATATTATCC TTTTTTTAAA AAACTTTTAA AGTAA
 
Protein sequence
MNFKPKKTSV FKEGDNLSFF IKKHIKKIKE NGVLVISSKI VALSEGRVLP PLTVKQKESL 
IKKESTGYIK TKLCFFTIKD AMVMTNAGID ESNSEGGKII LLPKDCYKTA SELVKELKKF
YKVKNFGVII TDSMILPLRA GVIGAAVGYS GFKGVKNYIG KKDIYGRKLK MTMVDIADSL
ASAASLLMGE ADEKTPLCVI ENAPVVFCAK DKKGEIKYPL EQDLYYPFFK KLLK