Gene Emin_0026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0026 
Symbol 
ID6262896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp28272 
End bp29078 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content38% 
IMG OID642610489 
Productsqualene/phytoene synthase 
Protein accessionYP_001874931 
Protein GI187250449 
COG category[I] Lipid transport and metabolism 
COG ID[COG1562] Phytoene/squalene synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATATA TGAATACATC TTACAAAAAA TCTAACTTCG GCTCAGCATT TTTATTTTTA 
AGCAAAGAAA AAAAAGAGGC CTTATCCGTT ATATACGCTT TTTGCCGCAT AGTTGACGAT
ATTGTAGATG AGCAGCACCC CAACGCGCAA GACGAGCTTG ATTTTTGGAA AAAAGAATTA
GATTCAGTAT TTTCTGCGGC TACGCCGCAA ACGAAGCTCG GCAAAGACCT TCAAAAACAG
GTGCCTTTAT TTAATTTAAC CAAAAAGAAT TTTTTGCTTT TAATTGAAGG AATGGAAATG
GATTTACACC AGCGCTCCTA CAAAACGTTT GATGAACTTA AGGAATATTT CTATAGAGTC
GCGGGCGTGG TAGGCCTTAT GTGCTGTGAG GTTTTCGGCG CCAAGGGCGA TGATGCGCGC
AACTACGCCA TAACCTTAGG CAACGCTGTA CAAATGACAA ATATTATACG CGATATCTAT
GAGGACGCCG AAATTGGCCG GATATACATA CCGTCTGAAG ATTTACAAAA ATTTGACATT
ACGCCAAAAG ATATCAAGAA TAAGTGTATG GCCCGTTTGG CTCCTTTGCT TAAAATGGAA
GGGGAAAAGG CCAAACAGCT TTTTAAAACC GCTAAAGAAA GCTTTCCTTC GGAATATAAA
AGCGCTTTAA AACCCGCAGT AATCATGGGC GCGGTATATG AGGCTATCTT AGATAAAATA
GCCGCTAAAA AATATAAATT TAATAAAAAA GTGCGTTTAA GCAAACTAAA AAAAATATCT
GTGCTACTTA AGGCTTTGAT AAAATGA
 
Protein sequence
MIYMNTSYKK SNFGSAFLFL SKEKKEALSV IYAFCRIVDD IVDEQHPNAQ DELDFWKKEL 
DSVFSAATPQ TKLGKDLQKQ VPLFNLTKKN FLLLIEGMEM DLHQRSYKTF DELKEYFYRV
AGVVGLMCCE VFGAKGDDAR NYAITLGNAV QMTNIIRDIY EDAEIGRIYI PSEDLQKFDI
TPKDIKNKCM ARLAPLLKME GEKAKQLFKT AKESFPSEYK SALKPAVIMG AVYEAILDKI
AAKKYKFNKK VRLSKLKKIS VLLKALIK