Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Emin_0026 |
Symbol | |
ID | 6262896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Elusimicrobium minutum Pei191 |
Kingdom | Bacteria |
Replicon accession | NC_010644 |
Strand | - |
Start bp | 28272 |
End bp | 29078 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642610489 |
Product | squalene/phytoene synthase |
Protein accession | YP_001874931 |
Protein GI | 187250449 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1562] Phytoene/squalene synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 91 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATATATA TGAATACATC TTACAAAAAA TCTAACTTCG GCTCAGCATT TTTATTTTTA AGCAAAGAAA AAAAAGAGGC CTTATCCGTT ATATACGCTT TTTGCCGCAT AGTTGACGAT ATTGTAGATG AGCAGCACCC CAACGCGCAA GACGAGCTTG ATTTTTGGAA AAAAGAATTA GATTCAGTAT TTTCTGCGGC TACGCCGCAA ACGAAGCTCG GCAAAGACCT TCAAAAACAG GTGCCTTTAT TTAATTTAAC CAAAAAGAAT TTTTTGCTTT TAATTGAAGG AATGGAAATG GATTTACACC AGCGCTCCTA CAAAACGTTT GATGAACTTA AGGAATATTT CTATAGAGTC GCGGGCGTGG TAGGCCTTAT GTGCTGTGAG GTTTTCGGCG CCAAGGGCGA TGATGCGCGC AACTACGCCA TAACCTTAGG CAACGCTGTA CAAATGACAA ATATTATACG CGATATCTAT GAGGACGCCG AAATTGGCCG GATATACATA CCGTCTGAAG ATTTACAAAA ATTTGACATT ACGCCAAAAG ATATCAAGAA TAAGTGTATG GCCCGTTTGG CTCCTTTGCT TAAAATGGAA GGGGAAAAGG CCAAACAGCT TTTTAAAACC GCTAAAGAAA GCTTTCCTTC GGAATATAAA AGCGCTTTAA AACCCGCAGT AATCATGGGC GCGGTATATG AGGCTATCTT AGATAAAATA GCCGCTAAAA AATATAAATT TAATAAAAAA GTGCGTTTAA GCAAACTAAA AAAAATATCT GTGCTACTTA AGGCTTTGAT AAAATGA
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Protein sequence | MIYMNTSYKK SNFGSAFLFL SKEKKEALSV IYAFCRIVDD IVDEQHPNAQ DELDFWKKEL DSVFSAATPQ TKLGKDLQKQ VPLFNLTKKN FLLLIEGMEM DLHQRSYKTF DELKEYFYRV AGVVGLMCCE VFGAKGDDAR NYAITLGNAV QMTNIIRDIY EDAEIGRIYI PSEDLQKFDI TPKDIKNKCM ARLAPLLKME GEKAKQLFKT AKESFPSEYK SALKPAVIMG AVYEAILDKI AAKKYKFNKK VRLSKLKKIS VLLKALIK
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