| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Emin_0018 |
|---|
| Symbol | |
|---|
| ID | 6263543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Elusimicrobium minutum Pei191 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010644 |
|---|
| Strand | + |
|---|
| Start bp | 17734 |
|---|
| End bp | 19191 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 642610481 |
|---|
| Product | alpha amylase catalytic region |
|---|
| Protein accession | YP_001874923 |
|---|
| Protein GI | 187250441 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0366] Glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAACAA ATCCTCATAT TCTTGAAATA AATACAGCAG TTTGGCTCAA CAAACTGAGT
GAAAAATATG GCAAAAAAAT TCCGCTTTGC CATGTTCCTG ACGAGGAACT TGATAAGTTT
AAAAAATACG GCTTTGACGC TGTTTGGCTT ATGGGCATTT GGAAACGCAG CCCGGAAGCC
CGGGAAGTAG CACAAAATAA TGAGGAAATA AAAAGAGCGA TAGCTGCTTT TAATCCCAAT
TATGATAAAA AGTATATCGC AGGGTCTCCT TACGCAATTT ATGACTATAC TATAGACCCT
GATTTGGGCA CTGAGGACGG GCTTAAAAAC TTTAGGCAGC GTTTAAACGA AAGAGGAGTA
GCGCTTCTTT TAGATTTTGT GGGTAATCAT TTTGCAATTG ACCATCCGCA AACCTTAGAA
AATCCCGATT TTTTTATTAA CACCGGCATG GAAGCGCCCG CTCAAAATCC GGAATGGTTT
TTCCGAACGG AAAAAGGCGT TTTTATAGCC CATGGGAGGG ACCCTTACTT TCCCCCGTGG
ACGGATACTG CGCAGCTTAA CTATTTTAAT CCTAAGACAC AGGAATATAT GTTGCAATGT
TTGGAAAGGA TATCTTCTTT CTGCGACGGA GTAAGGTGCG ACATGTCAAT GCTTTCATTA
AACAAAGTAA TGAAAGACAC TTGGGGAAAC TACCTTAAGT ATGATTATCC TAAAGAAGAA
TTTTGGACAA AAGCTGTAAG TAAAATCAAA AATATAAATC CGTTGTTTTC CTTTATTGCC
GAAGTTTATT GGGGCCTTGA GTGGGATATA CAGGAAATGG GTTTTGACTA TACTTACGAT
AAAGTTTTGT ATGACAGATT AAGATTTTCC ACAGCTGAAG CTATAGAAGC GCACTTAGGG
GCGGAACACT TATTTCAAAT GCGTTCTATA CGTTTTATTT CTAACCACGA TGAAGAGTCC
GCGTTAAAAG CTTTTGGTAA GGAAAAATCT TTAGCGGCCG CGGCTATAAT TTCAACAATT
CCCGGCGCAA AAATGTTTAG CTTAGACCAA ATTTTGGGGC ATAAAGAAAA GATTCCCGTA
CAATATACTT TGGAATCTGA AAAAGATGAT GAGGAGATAA TATCTTTTTA CCAAAAACTT
TTAAGTATTA TTAACCATCC TTCTTTTCAC GGCGGACAAT GGACGGTTAA AAAAGTTCTG
TCAGTAAACG ACAGTCTTAC TTACAAAAAT GTTTTGTGCT GCAGCTGGGT TCAAGGCATT
GAGCATAAAA TTGTTGTTAT AAATTATTCA AACGCCGAAG CTGTTTGTAA GGTTACTTTA
AAACGTTTTA AATTTAAAGA ACTTAAAGAT GACATCGCGG GAAAACCGGT TGATATTCCC
GTTGAAGAAG CATATAAAAA CGGGATTACG CTACAACTTA AACCATACGA GATTAAAATA
TACGGTACTA CCATTTAA
|
|---|
| Protein sequence | MRTNPHILEI NTAVWLNKLS EKYGKKIPLC HVPDEELDKF KKYGFDAVWL MGIWKRSPEA
REVAQNNEEI KRAIAAFNPN YDKKYIAGSP YAIYDYTIDP DLGTEDGLKN FRQRLNERGV
ALLLDFVGNH FAIDHPQTLE NPDFFINTGM EAPAQNPEWF FRTEKGVFIA HGRDPYFPPW
TDTAQLNYFN PKTQEYMLQC LERISSFCDG VRCDMSMLSL NKVMKDTWGN YLKYDYPKEE
FWTKAVSKIK NINPLFSFIA EVYWGLEWDI QEMGFDYTYD KVLYDRLRFS TAEAIEAHLG
AEHLFQMRSI RFISNHDEES ALKAFGKEKS LAAAAIISTI PGAKMFSLDQ ILGHKEKIPV
QYTLESEKDD EEIISFYQKL LSIINHPSFH GGQWTVKKVL SVNDSLTYKN VLCCSWVQGI
EHKIVVINYS NAEAVCKVTL KRFKFKELKD DIAGKPVDIP VEEAYKNGIT LQLKPYEIKI
YGTTI
|
|---|
| |