| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_7720 |
|---|
| Symbol | |
|---|
| ID | 6249303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010627 |
|---|
| Strand | - |
|---|
| Start bp | 488393 |
|---|
| End bp | 489307 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642599250 |
|---|
| Product | nodulation ABC transporter NodI |
|---|
| Protein accession | YP_001863656 |
|---|
| Protein GI | 186474685 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01288] ATP-binding ABC transporter family nodulation protein NodI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.948879 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCTG CAGCGATAAC GTTTACTAGC GTCAGGAAGT TATATAACGG CAAACAGGTC
GTTAACGGAC TTTCATTTCG CGTCGAGCGC GGCGAATGCT TTGGCCTACT GGGACCTAAC
GGCGCAGGCA AGAGCACGAC CGCGCGCATG GTCCTCGGTA TGGCCTCGCC TGACGCAGGT
ACGATCACTG TTCTTGGAGA GCCCGTGCCC GTACGCGCGC GCCTGGCACG GCGGCGTATC
GGCGTAGTTC CGCAATTTGA CAACCTTGAA CCCGGGTTCA CGGTGCGCGA GAACCTGCAG
ATATTCGGGC GCTACTTTGG CATGAGCGCC GACGAGGTCG AAGCGGTGAT TCCGTCGCTG
CTTGAATTCG CGCACCTGGA GAGCAAGGCT CACGCGCGCG TCGCAGAATT ATCTGGCGGC
ATGAAGCGTC GGTTAACCAT CGCCCGGGCG CTTATCAACG ACCCACAACT GCTGATAATG
GACGAGCCTG CGACCGGTCT TGATCCACAT GCGCGCCGCC TCGTCTGGGA CCGCTTGCGC
TCTCTACTTG CGCGCGGCAA GACAATCCTT CTAACTACTC ACTTCATGGA AGAGGCTGAG
CGATTGTGCG ATCGACTCTG TGTGATTGAC AAAGGACGCA GCATTGCGGA AGGTGCCCCT
CATGCGCTAA TCCATCAACA AATTGGAAGC CACGTGCTGG AGATATACGG CGGCGATTCG
CACGAACTGC GTGCATTGCT TGAGCCCTAC GCGCAGCGCA TGGAGGTGAG CGGCGAGACG
CTGTTTTGCT ATGCAGCCGA CCTGGAACAG GTGCGCATGC AGTTGTGCAA GCGAACGGGT
CTGCGCGTTC TGCAACGCCC CGCAAACCTG GAAGACGTGT TTCTTCGGTT GACTGGACGG
GATATGAAGG ACTAA
|
|---|
| Protein sequence | MAAAAITFTS VRKLYNGKQV VNGLSFRVER GECFGLLGPN GAGKSTTARM VLGMASPDAG
TITVLGEPVP VRARLARRRI GVVPQFDNLE PGFTVRENLQ IFGRYFGMSA DEVEAVIPSL
LEFAHLESKA HARVAELSGG MKRRLTIARA LINDPQLLIM DEPATGLDPH ARRLVWDRLR
SLLARGKTIL LTTHFMEEAE RLCDRLCVID KGRSIAEGAP HALIHQQIGS HVLEIYGGDS
HELRALLEPY AQRMEVSGET LFCYAADLEQ VRMQLCKRTG LRVLQRPANL EDVFLRLTGR
DMKD
|
|---|
| |