| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_7446 |
|---|
| Symbol | |
|---|
| ID | 6249030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010627 |
|---|
| Strand | - |
|---|
| Start bp | 215883 |
|---|
| End bp | 216704 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642599050 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_001863456 |
|---|
| Protein GI | 186474485 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR01457] HAD-superfamily subfamily IIA hydrolase, TIGR01457
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAGC AAATGCAAAT GCGGGCCTGG CCGCGCATCC GTGGCGTTGT CTCGGATCTC
GATGGCGTTG TCTATCGCGG AAAACAGGTG ATTGAAGAAT CGATCGAGGC TTTTCAGGAG
TGGCGCAGGC TCGGCGTGCC GTTCTGCTTC GTCACGAACA ATTCGACGCA TACCGAAGCT
GACGTGGTGA AAAAGCTTGC GGACATGGGA CTTCCGATCG AGCCGCAGGA GGTGGTCACG
TCCGCGGGCG AGACAGCGCG CCTGCTTCGT ACCATGTGGC CGGAAGGGAC ACCAGTGTAT
GTGATCGGTG CAGAGTCGCT CACAGACGCG GTTGCCGGGG CAGGTATGAA CATCACCGAC
CGTTCGCCAG CAGCTGTGGT CATGGGACTA GACCGCGCGA TTTCGCACGA GAAGATGCGC
GTTGCGGTAC AGGCCATTCT GGACGGTGCC ACATTGATTG GAACGAACCC GGACCTGTTG
TTGCCGACGG CCCAGGGATT CGAGCCGGGG GCGGGAGCGC AGTTGACTGC CGTGGCGGTG
GCGGCCCGGG TAAAGCCCAT CATTGTGGGC AAGCCGGAGA CGCACATGAT TGAAGCGGCG
CTGGCTCGCC TAGGCACAGC GCGCGAGGAA ACCATCATGG TCGGCGACCA GATTCCCACC
GATATCCAGG CGGGCAAGCG CGCCGGGTTG CACTCGGTGC TCATTACGAC GGGTGTGCCA
GCCGTCGAAG ATCCCGCGCT TTTGCCGCCC GATTTTGTCG TTCAAAGCCT GCGGGATATT
CCTGTCTTCA ACGAGAACGC TCTGGGAGCG AGTCATGGCT GA
|
|---|
| Protein sequence | MDKQMQMRAW PRIRGVVSDL DGVVYRGKQV IEESIEAFQE WRRLGVPFCF VTNNSTHTEA
DVVKKLADMG LPIEPQEVVT SAGETARLLR TMWPEGTPVY VIGAESLTDA VAGAGMNITD
RSPAAVVMGL DRAISHEKMR VAVQAILDGA TLIGTNPDLL LPTAQGFEPG AGAQLTAVAV
AARVKPIIVG KPETHMIEAA LARLGTAREE TIMVGDQIPT DIQAGKRAGL HSVLITTGVP
AVEDPALLPP DFVVQSLRDI PVFNENALGA SHG
|
|---|
| |