| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_7395 |
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| Symbol | |
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| ID | 6248845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010627 |
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| Strand | - |
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| Start bp | 164188 |
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| End bp | 166341 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642599016 |
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| Product | general secretion pathway protein D |
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| Protein accession | YP_001863422 |
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| Protein GI | 186474451 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.103776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.699876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTAC TTCGCATGGC AACGGCGTTG CTGCTGGCTG GACTGATCAC CGCGCACACT
GCATACGCAC AGGTGACGCT CAATTTCGTC AACGCCGACA TCGACCAGGT CGCCAAGGCG
ATTGGCGCGG CGACGGGCAA GACGATCATC GTCGACCCGC GCGTGAAAGG GCAGCTGAAT
CTCGTCTCCG AGAACCCGGT TCCGGAGGAC CAGGCGTTGA AGACCTTGCA GTCCGCGTTG
CGGATGCAGG GCTTTTCGCT GGTGCAGGAT CACGGCGTGC TTAAGGTCGT GCCCGAAGCG
GACGCGAAAC TGCAAGGCGT GCCGACTTAC GTCGGCAATG CGCCCGCGGC GCGCGGCGAT
CAGGTCGTCA CGCAGGTCTT TCAGCTGAAG AACGAATCGG CGAACAACCT GCTGCCCGTG
CTGCGTCCGC TCATCTCGCC GAACAACACG GTTGCGGCCT ATCCGCCGAA CAACACGATC
GTTGTCACCG ACTACGCTGA TAACGTGCGC CGCATCGCGC AGATCATCGC GGGCGTCGAT
ACGGCGGCCG GCCAGCAGGT GCAGGTCGTC CAGCTGAAGA ACGCGAACGC GATCGACGTC
GCGACGCAGA TGTCGAAGAT GCTCGACCCC GGCTCGATCG GCAATACGGA CGCGACGCTG
AAAGTCTCCG TGCAGGCCGA TCCGCGCACG AATTCGCTGA TGCTGCGTGC GTCGAACGCA
GCGCGCCTCG CGGCGGCGAA GTCGCTTGCG AAGCAACTGG ATGCTGCAAC GGGGCAGCCC
GGCAACATCC ACGTCGTGCA GCTGCGCAAC GCGGACGCCG TGCGCCTCGG GAAGACGCTG
CGCGGCATGC TCGGCAAGGG CGGCAACGAA TCGACGTCGT CGAGCGGCGG CAACGCAGCG
AACACGTTCA ACCAGGGCAA CACGAGCTCG TCGACGGGCA CGTCGGGCCA GCCTCCGCTG
CCGGGCGGCT CGCTCGGCGG TTCGTCGTCC TCGTCGATGG GCAGCAATCC GCTCGGCGGC
GGCAGCAACG AAGAGAACCA GCCCGGCGGC ATGATCCAGG CCGATGCGGC GACGAACTCG
CTGATCATCA CCGCGTCCGA CCCCGTCTAC CGCAATCTTC GCAGCGTGAT CGACCAGCTC
GACTCGCGTC GCGCGCAGGT GTATATCGAG GCGCTGATCG TCGAACTGTC GGCGACGTCG
AGCGCGAATC TCGGCATCCA GTGGCAGGGC GCGCTGCTGT CGAACGGCGG CAACAACGGT
CTTTACGGCA GTTCGAACTT CAATTCGAAC GGCAGCCAGG GCATCGTGAA CCTGACCGCG
CAGGGCGCGA TCATCGCGAA CAACCCGGCC GCGGCGCTCG CGACGACGGG CACGAACCTG
CTGAACAACG GCCTGAACGT CGGCCTGCTG CACCGCTTCG GCAATGTGTT CGGTCTGGGC
GGCCTGCTGC AGGCGCTGTC GCAATCGAGC GATGCGAACA TCCTGTCGAC GCCTAATCTG
ATCACGCTCG ACAACGAGGA AGCGAAGATC GTCGTCGGCT CGAACGTGCC TGTCGTCACG
GGTTCGTACG CGACGCCGAC TGCGAACGCC GCGACATCCG TGACCGCGTT CAACACGTTC
GACCGTCAGG ACGTCGGTAT CGTGCTGCAC GTGAAGCCGC AGATCACCGA CGGCGGCATC
ATCAAGCTGC AAATCTATTC GGAGGATTCG TCCGTCGATC CGACGTCGAC AAACAATCCG
GGCGGCGTGA CGATCATCAA GCGTTCGGTG CAGTCGACGG TGCTGTCCGA CGATGGCGAG
ATCATCGTGC TCGGCGGCCT GATGCAGGAC AACTACTCGA ACGGCAACAG CAAGGTGCCG
CTGCTTGGCG ACGTCCCGTG GATCGGCCAA CTGTTCCGTT CGGAGGAGAA GAGCCGCACG
AAGACGAATT TGATGGTGTT CCTGCGTCCC GTCATCATCA ACGATTGGGA TACGGCGCAG
GCTGTCACGT CGAACCGCTA CGACTATATC CAAGGTGTGC AGGGCGCGTA CCATCAGGAC
AACAACCTGA TGAAGGACAA CGACGATCCG ATGGTGCCGC CGAAGCCGGT CGGCCCGAGT
CAGGGCGGTT CGACCCTGAA TCTGTTCGAT CTCGACCAGA TGCGCCGCAA CTAG
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| Protein sequence | MALLRMATAL LLAGLITAHT AYAQVTLNFV NADIDQVAKA IGAATGKTII VDPRVKGQLN
LVSENPVPED QALKTLQSAL RMQGFSLVQD HGVLKVVPEA DAKLQGVPTY VGNAPAARGD
QVVTQVFQLK NESANNLLPV LRPLISPNNT VAAYPPNNTI VVTDYADNVR RIAQIIAGVD
TAAGQQVQVV QLKNANAIDV ATQMSKMLDP GSIGNTDATL KVSVQADPRT NSLMLRASNA
ARLAAAKSLA KQLDAATGQP GNIHVVQLRN ADAVRLGKTL RGMLGKGGNE STSSSGGNAA
NTFNQGNTSS STGTSGQPPL PGGSLGGSSS SSMGSNPLGG GSNEENQPGG MIQADAATNS
LIITASDPVY RNLRSVIDQL DSRRAQVYIE ALIVELSATS SANLGIQWQG ALLSNGGNNG
LYGSSNFNSN GSQGIVNLTA QGAIIANNPA AALATTGTNL LNNGLNVGLL HRFGNVFGLG
GLLQALSQSS DANILSTPNL ITLDNEEAKI VVGSNVPVVT GSYATPTANA ATSVTAFNTF
DRQDVGIVLH VKPQITDGGI IKLQIYSEDS SVDPTSTNNP GGVTIIKRSV QSTVLSDDGE
IIVLGGLMQD NYSNGNSKVP LLGDVPWIGQ LFRSEEKSRT KTNLMVFLRP VIINDWDTAQ
AVTSNRYDYI QGVQGAYHQD NNLMKDNDDP MVPPKPVGPS QGGSTLNLFD LDQMRRN
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