Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_7246 |
Symbol | |
ID | 6248753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | - |
Start bp | 1903484 |
End bp | 1904626 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642598888 |
Product | mandelate racemase/muconate lactonizing protein |
Protein accession | YP_001863290 |
Protein GI | 186471972 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000177277 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.41126 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGATG TCGTCCCTCC TTCCTCGACG TATTCAACGG ATCGCTTCGC CGCGCCCATC ACCCGAATCG CGGCCGATGC CTACACGATT CCGACCGACG CGCCCGAAGC CGACGGCACA TTCGAATGGC ATTCGACCAC GCTCATCGTC GCCGAGGTCG ACGCAGCGGA TGTCACGGGC ATCGGTTACA CGTACAGCGA CGCATGCGTC GCGACGCTGA TCCGGCAGAC GCTTGCCGAG GTACTGCTCA GCGAAGACGC GTCGCAGTTG GCGCGCCTCT GGCTGCGGAT GCAGCGCCGC GTGCGCAACA TTGGCCGCGA TGGCGTCGCG GCGACGGCAA TCTCGGCGCT CGACTGCGCG CTGTGGGATC TGCACGCGAA GCGCCTGAAT CTCCCGCTGG TCAAACTGCT CGGTCAGGCG CGCGACACCG TGCCCGTCTA TGGCAGCGGC GGCTTCACCA CTTACACGGA TTCGCAGATG CGCGAACAAC TGCGCGCATG GGCGCATCGC GACGGCTGCC GGTGGGTCAA GATCAAGATC GGCAGCGAGC CTGAGCGCGA TCCCGCCCGC GTGCGCATCG CGCGCGAAGC CATCGGTTCA AATGTGGGTC TGTTCGTCGA TGCGAACGGC GCGTTCGACA GCAAAACCGC GCTCCGCCAC GCCGAGCAAT TCGCGCAATA CGGCGTGCAG TGGTTCGAAG AACCCGTCTC GTCCGACGAT CTCGCCGGAC TGCATGCAGT CCGCCGCGCA GCGCCTTCGG GAATGAACAT TGCCGCCGGA GAATACGGCT ACACGTCCGA CTATTTCCGG CGAATGCTCG ACGCATGCGC CGTGGACGTG CTGCAAGCCG ATGCCAGCCG TTGCGGCGGC ATCACAGGTT TCATGCAGGC TGCGCACCTC GCGAACGCCT TTCATGTGCC GCTGTCCGCG CATTGCGCGC CCGCATTGCA TCTGCATGTC GCGGCAGCCG TGCCCGGCTT GTGCCACCAG GAATGGTTTC ATGACCATGC GCGGATCGAG TCGATGTTAT TCGACGGCGC GCCGCGTGTC GCCGATGGCT GCATCGCGCC GGATTGCACG CGACCGGGAT GCGGCCTGGA ACTGAAGCGG CAGGATGCAC GCCGCTTCGC CGTCGATACC TGA
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Protein sequence | MHDVVPPSST YSTDRFAAPI TRIAADAYTI PTDAPEADGT FEWHSTTLIV AEVDAADVTG IGYTYSDACV ATLIRQTLAE VLLSEDASQL ARLWLRMQRR VRNIGRDGVA ATAISALDCA LWDLHAKRLN LPLVKLLGQA RDTVPVYGSG GFTTYTDSQM REQLRAWAHR DGCRWVKIKI GSEPERDPAR VRIAREAIGS NVGLFVDANG AFDSKTALRH AEQFAQYGVQ WFEEPVSSDD LAGLHAVRRA APSGMNIAAG EYGYTSDYFR RMLDACAVDV LQADASRCGG ITGFMQAAHL ANAFHVPLSA HCAPALHLHV AAAVPGLCHQ EWFHDHARIE SMLFDGAPRV ADGCIAPDCT RPGCGLELKR QDARRFAVDT
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