| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_7218 |
|---|
| Symbol | |
|---|
| ID | 6248727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 1878051 |
|---|
| End bp | 1879289 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642598862 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001863264 |
|---|
| Protein GI | 186471946 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTACGGTT GTCATCAGAA GGATTCCGCT TCGCCAGGCG CGGCTGCGCC GGCGAAGACG
ATCATCACCG CGCTGGTCTG GGCGCCCGAC TGGCCCGAAG AGATGCTTCA GATCGCGGCC
GCGTTCAGCA AGGAGAATCC CGATATCGGC GTGAATGTGC AGTTCATGGT CGGCAATTCG
GTGGAGGCGA ACATCAAGCC CCGTATCGCC TCGGGCAACC TGCCGGATCT CGTCAGCGTG
AACCCGAATG CCTACTCGGC CGATCTGGCC GATCAGGGCA TACTCGCCGA AGTCGGCAAG
ACGGCGGCAT GGAATAACAT GCTCGATCCG CTCAAGGGCG ACTGGACGAG CCGTCGCCAG
TCGAAGGCGT TTGGCATTTC GGGCGGCGTG GCGACGGTGT TGATGTACTA CAACCAGGAC
ATGTTCGAGA AAGCCGGCAT CAAGGCGCTG CCGACCAATT TCCGCGAGTT CCTGGCCATC
TGCGAGCAGC TCAAGCGCGC GGGCTTCACG CCTGTCATGT GGAACGGCGG ATTTCCGAAC
ATGCTGGGCA ACGGTCCGTT CAGCTTCGGC TTCGCCAACA ACGTGGTGGC GCGCGAGCCC
GCCTGGAAAA AGAAGATCGA CGACGGCACG CTCAATTTAA ACACGCCTGC CGTCGCCGAT
ATATTTGCCA AGATGTCTCT GATCGTGGAG CGCGGTTACG TGCAGGACGG ATACATGGCG
ACGGACTACG ATGGCGGCAT CCGCCTGTTC AAGGAAGGCA AGGTCGCGAT GGCTTTCCAC
GGCAGCTGGG CGGCCGGTCT GTTGCTGCAC GGCAATCCGT TCCACGCGGG CGTCTTTATT
CCGCCGTGGA ACGCGCCCGG CAAGCGGGTC GTGCCCGTGA TCGGCAGCGA AACGGGCTTT
GCGGTGTGCG ACACGCCCAA CAAGGCTGCC GCCATGCGTT TTCTCGAATT CATCGCGGGC
AAGGGCTTCG GCATTCTGCA GGCGAAGCGC CAGAACATTT CGCCGTTCAG GCAAAGCGCC
GGTGCGATCG CAGGCGATCC GCGGATCGTC GAATATACGC GCGTCGTCAG TCGTTATCCC
GTCACGGCCA GCCCGTACTA TTCGGTGCTC CCGTCCAACT CCATCGAGAG CCTGCATCGT
CTGATGCAGG ATGTCCTCTT GAACCGGATC ACGCCGAAGC AGGCCGCCCA GCTCCTCGAC
GCGTCAGTCA AGAACGAAGC AAAGATGCAT TACAAATGA
|
|---|
| Protein sequence | MYGCHQKDSA SPGAAAPAKT IITALVWAPD WPEEMLQIAA AFSKENPDIG VNVQFMVGNS
VEANIKPRIA SGNLPDLVSV NPNAYSADLA DQGILAEVGK TAAWNNMLDP LKGDWTSRRQ
SKAFGISGGV ATVLMYYNQD MFEKAGIKAL PTNFREFLAI CEQLKRAGFT PVMWNGGFPN
MLGNGPFSFG FANNVVAREP AWKKKIDDGT LNLNTPAVAD IFAKMSLIVE RGYVQDGYMA
TDYDGGIRLF KEGKVAMAFH GSWAAGLLLH GNPFHAGVFI PPWNAPGKRV VPVIGSETGF
AVCDTPNKAA AMRFLEFIAG KGFGILQAKR QNISPFRQSA GAIAGDPRIV EYTRVVSRYP
VTASPYYSVL PSNSIESLHR LMQDVLLNRI TPKQAAQLLD ASVKNEAKMH YK
|
|---|
| |