Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_7192 |
Symbol | |
ID | 6248701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | + |
Start bp | 1843745 |
End bp | 1845472 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642598836 |
Product | methanol/ethanol family PQQ-dependent dehydrogenase |
Protein accession | YP_001863238 |
Protein GI | 186471920 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4993] Glucose dehydrogenase |
TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.426546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.582027 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGACAA GTCCGGCTTC CGCCACGCGG CTCGCGATGC TCGTCGCGGG CGTCGTGGCG GCAATCAGTC TGGAGCCCGC GACGGCAGCC GCCGCGGCCG ACTATCCGCC CGTGACCTAC GACCGGCTCA CGTCGGCGCA AAGCGATCCC GGCTGGCTCA CGTATTACCG CACCTACAAC GGCCAGGCGC ATTCGCCGCT CAAGCAGATC GACACGTCGA ACGTGAAGAA CCTGAAGCAG GCGTGGGCGT ACAAGTTTCC GGCGGACCTT CAGCAAGGCT TCGAAGCGAC GCCCATCATC AACGGCCGCT ATCTGTTCGT GACGACGCCC AAGGACAACG TCTATGCATT CGATGGCGCC ACCGGCAAGC AACTGTGGAA GTACGAACCG AAGCTCGGCG CCGAAGCGTT TAAGAACGCG TGCTGCGATG TCGTGAATCG CGGCGTCGCA CTCTATGGCA AGAACGTGTA TGTCGCGATG CTGAACGGCG AAGTGACCGC GCTCGATGCA CAAAGCGGCG CCGTCGTGTG GAAAAAAGCG ATGTTCGAGC CGGCCACGGG CTACGCGTTC TCGCTTGCGC CGCTTGCCCT TGACGGCGCA CTCGTGGTCG GCAGCTCGGG CGGCGAGTAT GGCGCGCGCG GCTTCATCGC GGCGCTCGAC CCCGAGAACG GCAACGTGCA ATGGAAGCGC TACACCGTGC CCGGCGCGAA GGAGCCGAAC GGCAATACGT GGCCCGACGG CATGCAGGAA CATGGTGGCG CACCGGCGTG GCTGACGGGC ACCTATGACC CGCAGAGCAA GACGCTCTAT TGGGGCGTCG GCAATCCCGG ACCGTGGCTC GCCGATCTTC GTCCCGGCGA CAACCTCTAT TCAGACTCGC TGCTCGCACT CGATCCCAAG ACCGGCAACC TCAAATGGCA CTACCAGTAC ACGCGTCACG ACACCTGGGA CTACGACGGC GTCAACACAC CCGTGCTCGC GAACATCAAG TACGACGGCA AGGACTATGA CGCGATCATC CACGCGGACC GCAACGGCTA TTTCCACGCG ATCGACCGCA GCAACGGCAA GCTGATCTAC GCGCGCCCGT TCGTGAAGGC CACCTCCGTC ACGGGCTACA CCGCGGACGG CAAACCCGTC CAGGACGAAT CGAAGTATCC GAAGACGGGC ACGACGATCG AGACCTGCCC AAGCTTTCTC GGCGGCAAGA ACTGGTGGTC GGTATCCTAC GACGCGGACA AGCACATCGC GATCATCCCC ACGCTGCACG CGTGCATGTC GCTGTCGGGT AAATCGGTCA CGTACATGGA AGGTCTGCCG TATCTCGGCG AAGGCTTCGA GATCAAGCCC GAACCGGGCA GCAAGGGTTA TGGCGAGCTT CAGGCCATCG ACGTCAACAC GGGCAAGCAG CTCTGGAGCC ATTGGAGCAA GCTGCCGTGG AACGGCGGCG TAGCGACGAC GGCGAGCGGC CTGGCGTTCA GCGGCTCGCT CGACGGACAC CTGTATGCGT TCGACGTGAC GAACGGCAAG GTGCTGTGGC AAAGCCCGAA GCTCGCGAGC GGCATCATCG CGCAGCCGTC GGTGTTCGAG ATCGACGGCA AGGAATATGT CGCGGTGCTG GCGGGCTATG GCGGCGCGAA TCCCATCTGG GGCGGCCCGA TGGCCAAGGC CGCCGACAAG GTGCCGCGCG GCGGAACGCT GTACGTGTTC GCGCTCAACC ATTCGTGA
|
Protein sequence | MKTSPASATR LAMLVAGVVA AISLEPATAA AAADYPPVTY DRLTSAQSDP GWLTYYRTYN GQAHSPLKQI DTSNVKNLKQ AWAYKFPADL QQGFEATPII NGRYLFVTTP KDNVYAFDGA TGKQLWKYEP KLGAEAFKNA CCDVVNRGVA LYGKNVYVAM LNGEVTALDA QSGAVVWKKA MFEPATGYAF SLAPLALDGA LVVGSSGGEY GARGFIAALD PENGNVQWKR YTVPGAKEPN GNTWPDGMQE HGGAPAWLTG TYDPQSKTLY WGVGNPGPWL ADLRPGDNLY SDSLLALDPK TGNLKWHYQY TRHDTWDYDG VNTPVLANIK YDGKDYDAII HADRNGYFHA IDRSNGKLIY ARPFVKATSV TGYTADGKPV QDESKYPKTG TTIETCPSFL GGKNWWSVSY DADKHIAIIP TLHACMSLSG KSVTYMEGLP YLGEGFEIKP EPGSKGYGEL QAIDVNTGKQ LWSHWSKLPW NGGVATTASG LAFSGSLDGH LYAFDVTNGK VLWQSPKLAS GIIAQPSVFE IDGKEYVAVL AGYGGANPIW GGPMAKAADK VPRGGTLYVF ALNHS
|
| |