Gene Bphy_7123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_7123 
Symbol 
ID6248633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp1781918 
End bp1782973 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content62% 
IMG OID642598768 
ProductRecT protein 
Protein accessionYP_001863170 
Protein GI186471852 
COG category[L] Replication, recombination and repair 
COG ID[COG3723] Recombinational DNA repair protein (RecE pathway) 
TIGRFAM ID[TIGR00616] recombinase, phage RecT family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0610415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.000150871 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAACGA CCAACATTAA AGACTTGAAG CCAAAGCCGC CCGTCGATCC GGCGACGCTC 
AAGCCGAAAG AACTGCTGGC GCACATGCTT GAGCGCAAGC GCAAGGACAT TGCAGCGATG
CTGCCGAGCG GCCCGCTGAC GGTTGACCGG CTCTTTAAGC TCGCCATCGT CGCAGCGACG
ACGACGCCCG CGCTCGCGAA ATGCGAGATT GCATCTGTGG TCGCGGCGGT CGGCTTCTGC
GCACAGCTTG GGCTCGAACC CAATACGCCG CTCGGGCATG CGTACCTCGT GCCGTTCAAC
ACGAAGCGCA AGGACGGCAA CGGTAACGAA TACTGGGTGA ATAGCGTTCA GGTCATCATC
GGGTATCGCG GCTATATCGA GCTTGCGCGC CGTAGCGGGC AAATCGTCAG CATCACCGCC
CACGAGGTGC GTGAGAAAGA CAAATTCACA TACGCATACG GTCTGCGCGA AAAGCTCGAC
CATATTCCCG CGCGCGGTGA TCGCGGCGAA ATCATCGGGT TCTATGCGGT CGCGATGTTC
AAGGGCGGCG GGCACGCGTT CGAATTTATG GACGTGGCGC AGATCAACGA AATTCGCGAC
GGCTCACAGG GCTGGCAGCA GGCGCAGAAG TACAAAAAGA CCGCGACGCA CCCTTGGCAA
AAACACTTCG TCGAGATGGG TCGCAAGAGC GCCATTCGCC GCATCGCGAA GTTTCTCCCG
CTCACGGTGC AACTCACACA GGCATTCGCC GCAGACGGTC GCACGATCAA CGATGCGCCG
CAGCTTAACG ACCCGAACAC CATCGACGGC GACTTTTCTT GGGTGCCCGA TGGCGACGGC
GACGACGAAC TGGCCGCTGC TGCTGCTGCT GACCAGAACA GCGCAGGCGA GCCGGGCGAC
GGCGAGCAGA GCGCAGATGA GCAGCCCGGC GACGAGCCCG CAGGCAATGC ACCGCCAGCG
TTGCCCGACG CCGATCCGTT CGACGCTTCG CAGCAACCCG CGAACGCATC GAAAAAGGCA
GCTGCCGATC CCGCATACGA GCGCCGGAAA GGCTAG
 
Protein sequence
MATTNIKDLK PKPPVDPATL KPKELLAHML ERKRKDIAAM LPSGPLTVDR LFKLAIVAAT 
TTPALAKCEI ASVVAAVGFC AQLGLEPNTP LGHAYLVPFN TKRKDGNGNE YWVNSVQVII
GYRGYIELAR RSGQIVSITA HEVREKDKFT YAYGLREKLD HIPARGDRGE IIGFYAVAMF
KGGGHAFEFM DVAQINEIRD GSQGWQQAQK YKKTATHPWQ KHFVEMGRKS AIRRIAKFLP
LTVQLTQAFA ADGRTINDAP QLNDPNTIDG DFSWVPDGDG DDELAAAAAA DQNSAGEPGD
GEQSADEQPG DEPAGNAPPA LPDADPFDAS QQPANASKKA AADPAYERRK G