Gene Bphy_7023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_7023 
Symbol 
ID6248538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp1684626 
End bp1686527 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content64% 
IMG OID642598673 
Producttype VI secretion protein 
Protein accessionYP_001863075 
Protein GI186471757 
COG category[S] Function unknown 
COG ID[COG3519] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03359] type VI secretion protein, VC_A0110 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCGC GCACGCTTGA GTTCTACACG CGCGAGCTTC GCTTCCAGCG CGCGATGGCA 
TCGGAATTTG CTGCTGACCA TCTGAAGATC GCAAGGCGCC TTGGCATGGA GGCGGGCGAC
ATTGGCGATC CTTATGTCGA GCGCCTTGTT CAAGGCTCCG CCTTTGTGAA CGCGCGCATC
CAGATGCGCT TCGACGATGA ATTCCCGCAG CTCACCCAGG CGCTGCTTTC CTGCGTCTAT
CCCAACTACC TCCTGCCCAC GCCATCCATC GCCGTGGCGC GGTTCTATCC GGGCGGCAAG
GCGGGCGACC TCGTGTCCGG TCACCGCATC ACGCGCGGCA CCCTCGCCAC CTCGAAACTT
CCCGAGGGCG AGAAGACGCC CTGCCAGTTT TCCCTTTGTC ACGACGTCAC GCTGTATCCG
CTTGAGATCA GCTTCGCGAA GCTGGGCGGC ATTCCGCCCG ACATCTACGG CATGGACCGT
TTCGTGCCAC CGCACCGGCG TGTACACGGC GGGTTGCGCC TGCGTATCCG CACAACCGGC
GATGTACCGG TGGCAAGCCT GCAGGGACTG GACAGGCTGC CCGTCTGCCT GGCGGGCGAC
GCGAAGCTCG CCTCGCACCT GCACGAGCTC ATTCACACGG CCGCGATTGC CACTGTGGCC
GGCGAGCCGG GGCGGTTCAG TGAGGCCGGG TATGCATACC ACACCGTCAC CTCGAATGCC
GTGATCCAGG AGGGGATTGG CCCAGAGGAG AGCGTCCTGC CGCTTGCCTC GCGAAAGTTT
CTCGGCCACA ACCTCGTGCA CGAGTATTTC GCGTGCCCCG AGCGCTTTTA CTTCTTCACG
CTCACCGGTC TCGCGGCGGG GCTGCGGAAC ATCAGCGGCC ATGAAGCCGA GATCGTGGTC
CTGCTGGATC GTCCTGCGGG AGATCTGGCG GACCGTGTCG ATGCGTCGAT GTTCGCACTG
TTCTGTGCCC CCGTGATCAA CCTCTTTCCC CTGCGCACCG AAAGCATGCC GATCCGCGAA
GGTGCCCCGG AAACGCACAT TGTGCCGGTG GAGAAGCGGC CACTCGACTT CGAACTGCAC
TCACTGGAGC GTGTGCTTGG GCAGGTTACC GAAGAGTCGG AGGTGCTGGA ATTCCGTCCG
CTGCACCAGG CGCTGATGCG CGACGAAGAC AGTCACGGGC GTTACTTCAC GGTACGGCGC
GAGCAGCACC TCGCCCCGGG CCAGTCCCGC CGGTACGGCA CACACTCGAC GTATGTCAGC
ACGGAGTCGT TCCTGCAGCT CGTTGGGCCG GATGGTGAAC CGTACGACAA CGGTGACGAC
GGCGAGATCC ACTTCGTGTC GGTGCAGGCG TGGGTGACCA ACCGCGACCT GCCCAGCCTG
CTGCGCTGCA ATGGCGTGCG CGACCTGGAT CTGCGCCAGT CGGCACCGGT CTCGAGTATC
GGTCTGATCC GGCCACCTGG CAGACCCAAA GCGCCGTTCG CTCAGGGCAT CAAGGCCTGG
CAACTGCTGA TGCACCTCGA TATCGATCAT TCGGTCTTCG ATGACCGGTA CGACGAGCCG
CACCCGGGCG AAGGGTTGCA AAGTTTTCTG CGGCTTTATC TCTCCGACGA CGCCGTGGCG
CATCGCCGGC AGGTCGAGAG CCTTACCGCA GCGACGCTCA CGCCGGTCAA CCGGATCATC
CCGAACCAGC AGCCACCGGT GGCGCGGGTG CTCGAATGCG GCATCACGGT CGACGAAAGC
GGCTTCGATG GCGCGAGCCC CTATGTCTTT GGTCTCGTGC TTGAGCACTA CCTGGCCCGG
CACGTTTCGA TGCATTCGTA CACGGCGATC GTGCTGGATT CGAAGCAGCG CGGGCGTATT
GCGCAGTGGC CACCCCGACC GGGTACACGC AGCGTGGTGT AG
 
Protein sequence
MDPRTLEFYT RELRFQRAMA SEFAADHLKI ARRLGMEAGD IGDPYVERLV QGSAFVNARI 
QMRFDDEFPQ LTQALLSCVY PNYLLPTPSI AVARFYPGGK AGDLVSGHRI TRGTLATSKL
PEGEKTPCQF SLCHDVTLYP LEISFAKLGG IPPDIYGMDR FVPPHRRVHG GLRLRIRTTG
DVPVASLQGL DRLPVCLAGD AKLASHLHEL IHTAAIATVA GEPGRFSEAG YAYHTVTSNA
VIQEGIGPEE SVLPLASRKF LGHNLVHEYF ACPERFYFFT LTGLAAGLRN ISGHEAEIVV
LLDRPAGDLA DRVDASMFAL FCAPVINLFP LRTESMPIRE GAPETHIVPV EKRPLDFELH
SLERVLGQVT EESEVLEFRP LHQALMRDED SHGRYFTVRR EQHLAPGQSR RYGTHSTYVS
TESFLQLVGP DGEPYDNGDD GEIHFVSVQA WVTNRDLPSL LRCNGVRDLD LRQSAPVSSI
GLIRPPGRPK APFAQGIKAW QLLMHLDIDH SVFDDRYDEP HPGEGLQSFL RLYLSDDAVA
HRRQVESLTA ATLTPVNRII PNQQPPVARV LECGITVDES GFDGASPYVF GLVLEHYLAR
HVSMHSYTAI VLDSKQRGRI AQWPPRPGTR SVV