Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_6772 |
Symbol | |
ID | 6248302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | - |
Start bp | 1389693 |
End bp | 1390457 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642598437 |
Product | histone family protein nucleoid-structuring protein H-NS |
Protein accession | YP_001862839 |
Protein GI | 186471521 |
COG category | [R] General function prediction only |
COG ID | [COG2916] DNA-binding protein H-NS |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000111168 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0541472 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACAC TCGAGAAGGT CCAGGCCCAA ATCGCAAAGC TTCAGGCGCA GGCAGAAGCG CTGGTCGTAA AACAGTCGTC CGGCGTAATC GCGAAGATTC GCGACATCAT GGAAAAGCAT GGTTTGACCA CGGCCGACAT TGAAGCGCAC ATCGGCGGTT CGAAAAAGCG TGGTCGCAAG CCCGGTGTCA AGGTTCCCGC CAAATCGTCA GCGTCGGCTG CAAAATATCG CGACCCGAAG AGTGGTGCTA CCTGGACCGG ACATGGTCGT GCGCCCGCGT GGATCGCGAA TGCAAAGGAC CGTAGTAAGT TTCTGACAGA TGGCGCACCG GATGCCCCGG TGACCGCTGC CAAGACGGCA GCTAAGGCCG GAAACTATGT TCGTGGGCCG CAGGCGCCGA AGTACCGTGA TCCGGTGAGC GGAGCAACCT GGAGCGGGCG TGGACCGGCG CCGGCGTGGT TGGCGGGCGC GAAGGATCGC ACGGCATTTC TGATTGACGC AGGTGCGGGC GAAGGCGACG TGAAACCGAA GGCGGCGAAA AAGGTAGCAA CCAAGAAAGC TGCCGCGAAG AAAGTAGGTG TGAAAAAGGC ATCTGCCAAA AAGGGCGCCG CCAAAAAGAG CGTTGCAACG GCCAAAAAGG CACCCGCGAA GAAAGTCGCG ACAAAGAAAG TGACGGCGAA GAAGGCTGCC GCGAAGAAAA CGGTCGCTGC TCCGGAAGCA CCGGCGCCGA GTAACGTTGC CGCGGCTGAA TCGACCGCCG CTTGA
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Protein sequence | MATLEKVQAQ IAKLQAQAEA LVVKQSSGVI AKIRDIMEKH GLTTADIEAH IGGSKKRGRK PGVKVPAKSS ASAAKYRDPK SGATWTGHGR APAWIANAKD RSKFLTDGAP DAPVTAAKTA AKAGNYVRGP QAPKYRDPVS GATWSGRGPA PAWLAGAKDR TAFLIDAGAG EGDVKPKAAK KVATKKAAAK KVGVKKASAK KGAAKKSVAT AKKAPAKKVA TKKVTAKKAA AKKTVAAPEA PAPSNVAAAE STAA
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