Gene Bphy_6772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_6772 
Symbol 
ID6248302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp1389693 
End bp1390457 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content60% 
IMG OID642598437 
Producthistone family protein nucleoid-structuring protein H-NS 
Protein accessionYP_001862839 
Protein GI186471521 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000111168 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0541472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAC TCGAGAAGGT CCAGGCCCAA ATCGCAAAGC TTCAGGCGCA GGCAGAAGCG 
CTGGTCGTAA AACAGTCGTC CGGCGTAATC GCGAAGATTC GCGACATCAT GGAAAAGCAT
GGTTTGACCA CGGCCGACAT TGAAGCGCAC ATCGGCGGTT CGAAAAAGCG TGGTCGCAAG
CCCGGTGTCA AGGTTCCCGC CAAATCGTCA GCGTCGGCTG CAAAATATCG CGACCCGAAG
AGTGGTGCTA CCTGGACCGG ACATGGTCGT GCGCCCGCGT GGATCGCGAA TGCAAAGGAC
CGTAGTAAGT TTCTGACAGA TGGCGCACCG GATGCCCCGG TGACCGCTGC CAAGACGGCA
GCTAAGGCCG GAAACTATGT TCGTGGGCCG CAGGCGCCGA AGTACCGTGA TCCGGTGAGC
GGAGCAACCT GGAGCGGGCG TGGACCGGCG CCGGCGTGGT TGGCGGGCGC GAAGGATCGC
ACGGCATTTC TGATTGACGC AGGTGCGGGC GAAGGCGACG TGAAACCGAA GGCGGCGAAA
AAGGTAGCAA CCAAGAAAGC TGCCGCGAAG AAAGTAGGTG TGAAAAAGGC ATCTGCCAAA
AAGGGCGCCG CCAAAAAGAG CGTTGCAACG GCCAAAAAGG CACCCGCGAA GAAAGTCGCG
ACAAAGAAAG TGACGGCGAA GAAGGCTGCC GCGAAGAAAA CGGTCGCTGC TCCGGAAGCA
CCGGCGCCGA GTAACGTTGC CGCGGCTGAA TCGACCGCCG CTTGA
 
Protein sequence
MATLEKVQAQ IAKLQAQAEA LVVKQSSGVI AKIRDIMEKH GLTTADIEAH IGGSKKRGRK 
PGVKVPAKSS ASAAKYRDPK SGATWTGHGR APAWIANAKD RSKFLTDGAP DAPVTAAKTA
AKAGNYVRGP QAPKYRDPVS GATWSGRGPA PAWLAGAKDR TAFLIDAGAG EGDVKPKAAK
KVATKKAAAK KVGVKKASAK KGAAKKSVAT AKKAPAKKVA TKKVTAKKAA AKKTVAAPEA
PAPSNVAAAE STAA