| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6642 |
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| Symbol | |
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| ID | 6248179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 1235820 |
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| End bp | 1236980 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642598314 |
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| Product | porin |
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| Protein accession | YP_001862716 |
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| Protein GI | 186471398 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000730188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAT CCTTACTCGC CCTCGCACTC CTTGGCGCTT TCACTGTTTC AGCGCATGCG
CAAAGCAGCG TCACGCTCTA CGGCCTGATC GACACCGGCC TGGTGTACAC CAACAACCAG
ATGGGTCACA GCAACTGGCA ACTGCTGAGC AGCTCGACGC AGAACACCGT ATTCGGCCTT
AAGGGAACGG AAGATCTTGG CGGCGGCCTG CATGCCGTGT TCAAGATCGA ACAGGGCTTC
CTGCTCAACA ACGGCGCGCA GGCATTCGCC GGCGACGCCT TCGGTTCGCA GGCGTGGGTC
GGTCTGCAAA GCGACCCGTA TGGCACGCTG ACGTTCGGTC GCCAGTTCGA CGTGATGAAC
GACCTCGTCG GCCCGCTGAC GGCGGAGTTC AACACGTGGG GCGGAAGCAT GGCCGCGCAT
CCGTTCGAGA ACGACAACCT GGCGGCGAAC TCCGTCGTCG TGAACAACAC GGTCAAGTAC
ACCAGCCCGA CGTATCGCGG CGTGACATTC GCAACGATGT ACGGCTTCAG CAACAAGGCG
GGTGACTTCG CGAACAATCG CTCGTATGGC TTCGGCCTGT CGTATGCGAT GGGGCCGCTC
AATCTGGCGG CGGGGTACCT GCAATTCAAC AACGCGGGCA ATAGCAGCGG CGCGATCACG
TCGTCCGATG CGAGCGCGAA CTTCATCGCG GAACGTCAGC GCATATGGTC GCTCGGCGGC
AACTACACCT TCGGCCCGGC GACCGTCGGC CTTGTATGGA GTCATACGCA GATCGACAAT
GCGTCGGGCG TGTTCTCGTT CGGCACAGGT ACTTATCTCG GCGCGAACGA TTCTTCGGCG
GGCACGCTGG CCGGTTCGCT GCGCCTCGAC AATTACGAGG TGAACGCGAA GTACGCGCTC
ACGCCGGCAT TGAGCGTGTC GGGCGCGTAC ACGTACACGC ATGGCGCGTA CAACGGCTCG
GCGCCGGGCT GGAATACGGC GATGCTGCAA ACGGATTACG CGGTCAGCAA GCGCACTGAC
TTCTACCTCG AAGGCGTGTA TCAGAATGTG CATGGCGCAC CGGCTGATTC GGTGCTGTCG
CACGCAATGA TCAATACGCT GTCGCCTTCG TCGACGGATT CGCAAGTGGC CGTGACAGTC
GGCATGCGCC ACACATTCTG A
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| Protein sequence | MKKSLLALAL LGAFTVSAHA QSSVTLYGLI DTGLVYTNNQ MGHSNWQLLS SSTQNTVFGL
KGTEDLGGGL HAVFKIEQGF LLNNGAQAFA GDAFGSQAWV GLQSDPYGTL TFGRQFDVMN
DLVGPLTAEF NTWGGSMAAH PFENDNLAAN SVVVNNTVKY TSPTYRGVTF ATMYGFSNKA
GDFANNRSYG FGLSYAMGPL NLAAGYLQFN NAGNSSGAIT SSDASANFIA ERQRIWSLGG
NYTFGPATVG LVWSHTQIDN ASGVFSFGTG TYLGANDSSA GTLAGSLRLD NYEVNAKYAL
TPALSVSGAY TYTHGAYNGS APGWNTAMLQ TDYAVSKRTD FYLEGVYQNV HGAPADSVLS
HAMINTLSPS STDSQVAVTV GMRHTF
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