Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_6591 |
Symbol | |
ID | 6248128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | - |
Start bp | 1176881 |
End bp | 1178503 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642598263 |
Product | extracellular solute-binding protein |
Protein accession | YP_001862665 |
Protein GI | 186471347 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.476219 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCG ATAAATCGCC TGAAGCAGTC GCCCATGCCG GCATCCGGCT CGAAGAGTTG ACGCGCCGCG GTGCTTCGCG GCGCGACGTG CTGCGCGCGA TGGCGGCGGG CGGCTTGATG TCGCTGACGG GCGCTGGCCT GCTGGCGACG AGCAGCGGCG CCGCCGCGCA ACAGCAGGCC AAACCGAAGC AGGGTGGCAA GATTCGCGTC GCGACGCAGT CGGCGTCCGC CGCGGACACG CTCGATCCCG CGAAGGGTGC GCTCGGCACC GACTACGTGC GCGCCAACAT GTTCTACAAC GGCCTGACGG AACTCGACTC GCATCTCGGC GCGAAGATGG CGCTGGCGGA ATCGCTGGAC ACGAAGGATG CGACCGTGTG GGTCGTCAAG CTGCGCAGCG GCGTGCAGTT CCATGACGGC AAGTCGCTTA CGCCGCAAGA CGTGATCTAC TCGTTGATGC GCCACAAGGA TCCCGCTGTC GGCTCGAAAG CGAAGACGCT CGCCGACCAG ATCAAGGATG CGAAAGCGAC AGGCCCGAAC GAAGTGACGA TCACCCTCGA AGGCGCGAAC GCGGACTTGC CCGTGATTCT AGCCACGTCG CACTTCCTGA TCATCAAGGA CGGCACGACC GACTTCAAGA CCGCCGTCGG CACGGGTCCG TTCAAGCTCA GGGAATTTTC GCCGGGCGTG CGCACGGTCG GCGTGCGCAA CGAGAAGTAC TGGAAGCCGG GCATGCCGCA TCTCGACGAA GTCGAGCTGA TCGGCATCGG CGACGAATCG GCGCGCGTGA ATGCGCTCCT GTCCGGCGAC GTGCAGCTGA TCAATGCCGT GAGCCCGCGA TCGACGGCGC GCATCAAGGG CACGCCCGGT TTCTCGGTGC TGGAGACGAA GACGGGTCAG TACACCGACC TCATCATGCG CGACGAAGGC GGCATCACGG GCACGGCGGA TTTCCGCCGC GGCCTGACGC ATCTGATGGA TCGCGAGCAG ATCCGACGCG CCGTGTTTCT CGGCTATGGC GCGATCGGCA ACGACCAGCC GATCGATCCG ACCAACAAGT ACTACATGGC GGGCCTGCCG CAACGCGCGT TCGACCCGGA GAAGGCAAAG TTCTACTTCC AGAAGGCCAA GCTTGGCAGC GCGCCCGTGC AGCTGTACGC GTCGCCCGCC GCCGAAGGCT CCGTCGAAAT GGCCATGCTG CTGCAACAGG TCGCGCCGCA AGCGGGCCTG AATCTGCAGG TGGTGCGCGT GCCGTCCGAC GGCTACTGGT CGAACCACTG GATGAAGCAT CCGCTCGGCT ACGGCAATAT CAACGCTCGC CCGAGCGCCG ACGTGCTGTT CACGCAGTTC TTCAAGTCCG ACGCGCCGTG GAACGAGGCG AACTGGAAAA ACCCCAAGTT CGATCAGATG CTGGTCGCCG CGCGCGGCGA ACCGGACGAC GCGAAGCGCA AGAAGATCTA CGGCGATATG CAGCAGCTCG TGCATGAAGA CGGCGGCATT GGCATTCCGA TGTTCCAGAG TTCGCTCGAC GCGCATTCGT CGACGCTCAA AGGGCTCGGC TCGATTCCGC TGGCCGGCCT GATGGGCTTC ATGTTCGCGG AGAACGTCTG GCTCGACGCC TGA
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Protein sequence | MSIDKSPEAV AHAGIRLEEL TRRGASRRDV LRAMAAGGLM SLTGAGLLAT SSGAAAQQQA KPKQGGKIRV ATQSASAADT LDPAKGALGT DYVRANMFYN GLTELDSHLG AKMALAESLD TKDATVWVVK LRSGVQFHDG KSLTPQDVIY SLMRHKDPAV GSKAKTLADQ IKDAKATGPN EVTITLEGAN ADLPVILATS HFLIIKDGTT DFKTAVGTGP FKLREFSPGV RTVGVRNEKY WKPGMPHLDE VELIGIGDES ARVNALLSGD VQLINAVSPR STARIKGTPG FSVLETKTGQ YTDLIMRDEG GITGTADFRR GLTHLMDREQ IRRAVFLGYG AIGNDQPIDP TNKYYMAGLP QRAFDPEKAK FYFQKAKLGS APVQLYASPA AEGSVEMAML LQQVAPQAGL NLQVVRVPSD GYWSNHWMKH PLGYGNINAR PSADVLFTQF FKSDAPWNEA NWKNPKFDQM LVAARGEPDD AKRKKIYGDM QQLVHEDGGI GIPMFQSSLD AHSSTLKGLG SIPLAGLMGF MFAENVWLDA
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