| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6530 |
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| Symbol | |
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| ID | 6248067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 1112210 |
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| End bp | 1113559 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642598202 |
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| Product | glucarate dehydratase |
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| Protein accession | YP_001862604 |
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| Protein GI | 186471286 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.124321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.118965 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACGA TTGCATCTTC GCCCCAAGGC GCACCGACCG TCACCGAATT GCGCGTCGTT
CCTGTCGCTG GCCGCGACAG CATGCTGATG AACCTCAGCG GCGCGCACGG CCCGTTCTTC
ACGCGCAACA TCGTGATTCT GCGTGACAGT TCGGGCCACA CCGGTGTCGG CGAAGTGCCG
GGCGGCGAGA ACATCCGCAA GACCATCGAC GATGCGCGTC CATTCGTCGT CGGCCAGTCC
ATCGGCAATC TGCAGGCCGT ACTCAACCAG GTGCGCAAGC AATTCGCCGA TCGCGACGCA
GGCGGCCGCG GCTTGCAGAC TTTCGACCTG CGCACGACGA TCCACGCCGT GACAGCGCTC
GAAGCCGCGT TGCTCGATCT GCTCGGCCAG CATCTGGGCG TGCCCGTTGC AGCGCTGCTC
GGCGAAGGTC AGCAACGCGA CGAAGTCGAG ATGCTCGGCT ATCTGTTCTA CATCGGCGAT
CGCAAAAAAA CCGACCTGCC GTATGCCAGC GGCGCGGAAG GCCGCGACGA CTGGGAGCGC
GTTCGCACCG AAGAAGCGAT GACGCCCGAA ACCGTGGTGC GTCTGGCCGA GGCCGCGCAA
GCGCGCTACG GCTTCAACGA CTTCAAGCTG AAGGGCGGCG TGCTGGCAGG CGACGCAGAA
ATCGAAGCTG TGACGGCGCT CGCCGAACGC TTCCCGCAAG CGCGCGTGAC GCTCGATCCG
AACGGCGCAT GGTCGCTCGC CGAAGCGATT CGCCTGTGCC GCGACCAGCA TCACGTGCTG
GCCTATGCGG AAGATCCGTG CGGCGCGGAG AACGGTTACT CGGGCCGCGA AGTGATGGCC
GAGTTCCGCC GCGCGACGGG CCTGCCGACG GCGACCAACA TGATCGCCAC TGACTGGCGC
CAGATGGGCC ACGCCATCCA GCTGCAATCC GTCGACATTC CGCTCGCCGA TCCGCATTTC
TGGACCATGC AAGGCTCGGT GCGCGTCGCG CAGATGTGCA ACGACTGGGG GCTCACGTGG
GGCTCGCATT CGAACAACCA CTTCGACGTT TCGCTCGCGA TGTTCACACA CGTCGCAGCC
GCTGCGCCCG GCAAGATCAC GGCAATCGAC ACGCACTGGA TCTGGCAGGA CGGTCAGTAC
CTGACACGCG ATCCGCTGCA GATCGTCGGC GGCAAGGTGA AGGTGCCGGC GAAGCCGGGT
CTCGGCGTCG AACTGGACAT GGACGCGCTC GAGAAAGCGC ACGCGCTGTA TCAGCAGCAC
GGCCTTGGCG CGCGCGACGA CGGCGTCGCG ATGCAGTACC TGATCCCGAA CTGGAAGTTC
GACAACAAGC GCCCTTGCCT CGTGCGCTAA
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| Protein sequence | MSTIASSPQG APTVTELRVV PVAGRDSMLM NLSGAHGPFF TRNIVILRDS SGHTGVGEVP
GGENIRKTID DARPFVVGQS IGNLQAVLNQ VRKQFADRDA GGRGLQTFDL RTTIHAVTAL
EAALLDLLGQ HLGVPVAALL GEGQQRDEVE MLGYLFYIGD RKKTDLPYAS GAEGRDDWER
VRTEEAMTPE TVVRLAEAAQ ARYGFNDFKL KGGVLAGDAE IEAVTALAER FPQARVTLDP
NGAWSLAEAI RLCRDQHHVL AYAEDPCGAE NGYSGREVMA EFRRATGLPT ATNMIATDWR
QMGHAIQLQS VDIPLADPHF WTMQGSVRVA QMCNDWGLTW GSHSNNHFDV SLAMFTHVAA
AAPGKITAID THWIWQDGQY LTRDPLQIVG GKVKVPAKPG LGVELDMDAL EKAHALYQQH
GLGARDDGVA MQYLIPNWKF DNKRPCLVR
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