| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6490 |
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| Symbol | |
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| ID | 6248029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 1069788 |
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| End bp | 1071893 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642598164 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001862566 |
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| Protein GI | 186471248 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.519588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.249204 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCGC TCGTTGACAT CAATTCGCAC GTCCGGGATG TTCTGAATAT CGTCAACAAC
CAGCCTGCCA CCTGCTCGAT GAGCCATTCC GTCGCGCAAT CGTGGACGCG CTGTCTCGTC
GATTTCGGAC TGGACCCCGG ACGTTTCGTG ATGCCACCCG TGCTCACGCA GCAGGAGCTG
AACACGCACC GCGAGGCCGC GGGCGATCTG ATCGCCTGCT CGAAGCTGGA AATGACCACG
CTGTACCAGC AGCTCGCCGA CCCCGAACTC GCCGTGATTC TCGTCGATGC GAACGGCGTA
ATCGTGCATC AGGTGTCGTC GGTGCCGTTC GGCGAGGCCG TGGCAGCCGA CGGCCTGCGC
GTCGGCGCAG TGTGGAGCGA GCGCGAGGCG GGCACGAACG GCATGGGCAC GTGCCTGACG
GAGCGCGAAT GTCTCGCCAT CTATCAGCAC GAACATTTCT ATCCGCGCTA CACGTCGCTC
ACCTGCTCGG CTGCACCGAT TTTCGACGAA CGCGGCACGA TAGTCGGCGT GCTCGACGTG
ACGAGCCGCT CGAAGATGCT GCAACAGCAT TCGCTCGTGC TGGTCGGCAT GTCGCGGCAG
ATGATCGAGA ACCGGCTGAT CGATTCGCGC TACCGGCGCG CGAACACCGT CCACTTTCAC
AGCCGGCCGG AATTCGTCGG CACGCTGCAT GCCGGCAAGC TGGCCGTCGA CGACGACGGC
GTCGTGCTGG CCGCGAATCG CAGCGCGCTG TTCCAGCTCG ATCTGCGCTC CCCCGACCAG
CTGTGCGGCA AGCGAATCGA AGAAGCGTTC AGCGCAACGC TCGAAGACAT GATTGCGCGC
AGCATCCGCG GCTCGTTCCA TCCCATCACC GTCTATAGCG CGCACGCCAA CAACCGTTTC
TTCGTGATCG CACAAACGCC GCGCGATGCG GAGTCGTTCG GCGCCGCGAG CCACGCGCTA
CCCAGTGCGC GTGGACCGTG GAGCGACGTC TCGATCAATC GCAATGCGCG CGCGAAAACG
CCGCGCGAAG CAAAACCCGC TGCCGCGGGC CTCGACAAGC TCTCGCACCT GGAGTTCGGC
GATCCGCGCA TGGCCGCGCA AAGCCAGCTG GCCGCGCGCG TGATTCAGCG CAAGATCCCT
ATCATCCTGC GAGGCCAGAC GGGCACGGGC AAGGAAGTCT TCGCCAACGC GCTGCACAGC
ATCAGCCCCA ACGCGGCGGG TGCTTTCGTC GCGGTGAATT GCGCGTCGCT GCCCGAGACG
CTGATCGAAA GCGAGCTGTT CGGCTACCGC GCGGGCGCGT TCACGGGCGC GCAGCGCGAG
GGCCGGCGCG GCAAGATCGT GCAGGCGAAC AACGGCACGC TGTTCCTCGA TGAAATCGGC
GACATGCCGA TGGCCTTGCA GGCGCGGCTG CTGCGCGTGC TGGAGGAGCA CGAGGTCACG
CCGCTCGGTG CCGAAACCAC GATCAAGGTC GACTTTCAAC TGATCAGCGC GAGCCATCGC
AATCTGCTCG ATCTGGTGCA GCGCGGCCTG TTCCGCGAAG ACCTGTACTA CCGGCTGAAC
GGCATCGAAA TCAATCTGCC GCCGCTGTGC GAGCGCGCCG ATCTGCTGCC GCTGGTGCAG
CACATCCTCG AAAGCGAATC GGACGATCCC CCCGAACTGA GCGCCGAAGC CCGCCAGGCG
CTAGCGAGCT ACGCGTGGCC CGGCAATATC CGGCAATTGC GGCACGTGCT GCAAATGGCA
ATCGCGCTGT GCGACGGGCC GGAAATCCGC TGCGCGCATC TGCCCGCCGA AATCGTCGAC
GATGCACGCG GTACGAACCC GCGCGCTTCG TCTGCGGGAC AGTTTGCGCA GCCTGCGCGC
GCGGCCGTCG CACCGCCGTT CGACGATGAC ACCGACCTGT CGGCGCTCAA CGCGATCCAG
CTCAAGGAAC GCGAAACCGT CCTCGCGATG CTCGATGAAC ACCGCTGGAA TGTCAGCAAC
GTCGCGAAGA CACTCGGCAT CAGCCGCAAC ACCTTGTACC GGAAGATGCA CAGACTGCAC
ATCCGGCTCT CGCACGATGG GGCGCAAGCT TCGGCTGACG ACGCAGCGAG CATGAATGGC
CGATGA
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| Protein sequence | MSSLVDINSH VRDVLNIVNN QPATCSMSHS VAQSWTRCLV DFGLDPGRFV MPPVLTQQEL
NTHREAAGDL IACSKLEMTT LYQQLADPEL AVILVDANGV IVHQVSSVPF GEAVAADGLR
VGAVWSEREA GTNGMGTCLT ERECLAIYQH EHFYPRYTSL TCSAAPIFDE RGTIVGVLDV
TSRSKMLQQH SLVLVGMSRQ MIENRLIDSR YRRANTVHFH SRPEFVGTLH AGKLAVDDDG
VVLAANRSAL FQLDLRSPDQ LCGKRIEEAF SATLEDMIAR SIRGSFHPIT VYSAHANNRF
FVIAQTPRDA ESFGAASHAL PSARGPWSDV SINRNARAKT PREAKPAAAG LDKLSHLEFG
DPRMAAQSQL AARVIQRKIP IILRGQTGTG KEVFANALHS ISPNAAGAFV AVNCASLPET
LIESELFGYR AGAFTGAQRE GRRGKIVQAN NGTLFLDEIG DMPMALQARL LRVLEEHEVT
PLGAETTIKV DFQLISASHR NLLDLVQRGL FREDLYYRLN GIEINLPPLC ERADLLPLVQ
HILESESDDP PELSAEARQA LASYAWPGNI RQLRHVLQMA IALCDGPEIR CAHLPAEIVD
DARGTNPRAS SAGQFAQPAR AAVAPPFDDD TDLSALNAIQ LKERETVLAM LDEHRWNVSN
VAKTLGISRN TLYRKMHRLH IRLSHDGAQA SADDAASMNG R
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