| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6478 |
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| Symbol | |
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| ID | 6248017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 1058601 |
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| End bp | 1060421 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642598152 |
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| Product | methanol/ethanol family PQQ-dependent dehydrogenase |
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| Protein accession | YP_001862554 |
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| Protein GI | 186471236 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.975384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.155074 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTAC GCACCCTGGT TCTTGGACTG GCGGTGTTGG TTGCGACGGC GCTGAACTCG
TTCCTTGCGT ATGCCGATCC GCAACTGGAC TCGCTGATCA AGAACCCATC GAACTGGGCG
GCGCAGGCAG GTGACTATGC GAATCACCGG TACAGCCCGC TCAAGCAGAT CAATGAAAGC
AATGTCGGCA AGCTGCAGGT CGCGTGGACG ATGTCGACGG GCGTGTTGCG CGGTCACGAA
GGCTCGCCTC TCGTGATCGG CGACACGATG TATATCCACT CGCCGTTCCC CAACAAGGTC
ATCGCGATCA ACCTGAAGGA CCAGACCTTC ATCTGGCAAT ACGAGCCGAA GCAGGACGCG
TCGGTGATCT CCGTGATGTG CTGCGATACC GTCAACCGCG GTCTCGCGTA CGGCGACGGC
AAGATCTTCC TGCAACAGGC CGACACCAAG CTCGTCGCGC TCAACGCGAA GACGGGCGAA
GTGGTGTGGA CCGCGCAGAA CGGCGACCCG AAGGCAGGCG AGACCAACAC CAACGCGCCG
CACGTGTTCG GCGACAAGGT GCTGACGGGC ATCTCCGGCG GCGAGTTTGG CGTGCGCGGC
CGTTTGATCG CATACGACAT CAAGACCGGC AAGGAAGCGT GGAAGGCGTA TAGCACCGGG
CCCGACAACG AGATGCTGCT CGATCCGCAG CAGACGATGA CCTGGGCAGA CGGCAAGATG
CAGCCCGTCG GCGCGGATTC GTCGATCAAG AGCTGGAAGG GCGATCAGTG GAAACTCGGC
GGCGGCACCA CATGGGGCTG GTACGCGTGG GATCCGAAGC TGAATCTGGT CTATTACGGC
ACGGGCAATC CGGGCACATG GAATCCGACG CAGCGTCCCG GCGACAACAA GTGGTCGATG
TCGATCTTCG CCCGCGACCT CAATACGGGC AAGGCGAAAT GGGTCTATCA GATGACGCCG
CACGACGAGT GGGACTATGA CGGCGTCAAC GAAATGATCC TTGCAGACAT TGCCGTCAAC
GGCAAGAAGA CGCCAGCGAT CGTGCACTTC GACCGTAACG GCTTCGGCTA TACGCTCAAC
CGCGAGACAG GCGAACTGCT GGTTGCACAG AAGTACGACC CGGCCGTGAA CTGGGCGGAC
AGCGTGGACC TGAAGAGCGG TCTGCCGATT CGCAATGCTT CGTACTCGAC GCAAAAGGCC
GGTCCCGACC ACAACGTGAA GGGCATCTGC CCGGCCGCGT TGGGTTCGAA GGACCAGCAG
CCGGCTTCTT TCGATCCGGG CTCGAATCTG TTCCTCGTGC CGACCAATCA TGTCTGCATG
GACTACGAGC CGTTCGATGT CGATTACGTG TCTGGCCAGC CGTATGTAGG CGCGACGCTG
TCGATGTATC CCGGTCCGGA CGAGAAGGGC GCGATGGGCA ACTTCATCGC GTGGGATGCG
GCGAAGGGCA AGATCGTCTG GTCGAAGCCC GAACGCTTCT CGGTGTGGTC GGGCGCGTTG
GCGACGGCAG GCGGCATTGT CTTTTACGGC ACGCTGGAAG GCTACATCAA GGCCGTGCGG
ATCAAGGACG GCAAGGAGTT GTGGAAGTTC AAGACGCCGT CGGGAATCAT CGGCAACGTG
TTCACGTATG AGTATCAGGG CAAGCAGTTC GTCGGTGTGT ATTCGGGCAT CGGCGGCTGG
GCGGGCATCG GCATGGCAGC CGGTCTGCAG AAGTCGACGG AAGGCCTTGG CGCTGTCGGC
GGCTATCGCG AGCTGGCGAA GTACACGGCT CTCGGCGGCA CGCTGTTCGT TTTCGCCGTT
CCGGGCGGAT CGAACGGCTG A
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| Protein sequence | MNVRTLVLGL AVLVATALNS FLAYADPQLD SLIKNPSNWA AQAGDYANHR YSPLKQINES
NVGKLQVAWT MSTGVLRGHE GSPLVIGDTM YIHSPFPNKV IAINLKDQTF IWQYEPKQDA
SVISVMCCDT VNRGLAYGDG KIFLQQADTK LVALNAKTGE VVWTAQNGDP KAGETNTNAP
HVFGDKVLTG ISGGEFGVRG RLIAYDIKTG KEAWKAYSTG PDNEMLLDPQ QTMTWADGKM
QPVGADSSIK SWKGDQWKLG GGTTWGWYAW DPKLNLVYYG TGNPGTWNPT QRPGDNKWSM
SIFARDLNTG KAKWVYQMTP HDEWDYDGVN EMILADIAVN GKKTPAIVHF DRNGFGYTLN
RETGELLVAQ KYDPAVNWAD SVDLKSGLPI RNASYSTQKA GPDHNVKGIC PAALGSKDQQ
PASFDPGSNL FLVPTNHVCM DYEPFDVDYV SGQPYVGATL SMYPGPDEKG AMGNFIAWDA
AKGKIVWSKP ERFSVWSGAL ATAGGIVFYG TLEGYIKAVR IKDGKELWKF KTPSGIIGNV
FTYEYQGKQF VGVYSGIGGW AGIGMAAGLQ KSTEGLGAVG GYRELAKYTA LGGTLFVFAV
PGGSNG
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