| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6447 |
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| Symbol | |
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| ID | 6247986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 1028960 |
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| End bp | 1031275 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642598121 |
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| Product | lysine decarboxylase |
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| Protein accession | YP_001862523 |
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| Protein GI | 186471205 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.295731 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCCG CGACGGAATC CGTCTATCGC CGCCTCGGTA TGAAGGCGCT GCTGGTGCAT
CACGCATCCG ACGCGCGCAC GGCAAGCGGG CGCGCTGCGC AGTCGCTCGC AGACGAACTC
GAAGAACGGC ACGTGCGCGT TGTAACGGCA GCATCCGCCG ACGACGCCGT GTCCGTGATC
CGCTCTGATC CGTTGATCCA GTGTCTGCTG CTGAGCTGGG AACTCGGTGA CGACGAAACG
CATCAACAGG CGCAGAGCGT GCTCGATGCG CAGCGGGTGC GCAGCGCAAC CGTCCCGATC
TTCCTGCTCG CCAGCCGCAC GAGCGCCGCG ACGATCCCCG TCGACGCTAT GCAGAAAGCC
GACGACTTCA TCTGGATGCT GGAAGACACC ACGTCGTTCA TCGCCGGCCG GATCATTGCT
TCGATCGATC GCTACCGCGA GTCCGTGCTG CCGCCGATGT TCGGCGCGCT CGCGCGCTTT
TCGAAGGTAT TCGAATATTC GTGGCACACG CCGGGGCACA CAGGCGGCAC GGCATTCATG
AAGTCGACCG TCGGCCAGGC GTTCTTCGAA TTCTTCGGCG AACAGCTATT CCGTTCCGAC
CTGTCCATTT CTGTCGGCGA ACTCGGCTCG CTGCTCGACC ATAGTGGTCC GATCGGCGAA
AGCGAGCGCT ACGCTGCGCG CGTGTTCGGC TCGCATCGCA CATATCACGT GACCAACGGC
TCGTCGATGT CGAACCGTGT GATCCTGATG GCAAGCGTGA CGCGCAATCA GATCGCACTA
TGCGACCGCA ACTGCCACAA GTCTGCGGAA CATGCGATGA CGATGTCGGG CGCGATACCG
ACGTATCTGA TTCCATCGCG CAACCGTTAC GGCATCATCG GCCCGATCAT GCCCGAGCGG
CTCACGGCGG CGGCGATTCG TCTGCTGATC GACCAGAACC CGCTCGTCAG GGACCGCGAT
GGCGTGGACC CCACGCCCGT CCATTCCCTC GTGACGAATT CGACTTACGA CGGACTGTGC
TACAACGTGA CGCGCCTCGA GGAACTGCTG GGCGAAAGCG TCGACCGCCT GCATTTCGAC
GAAGCCTGGT ATGGCTATGC GCGTTTCAAT CCGCTCTACA AGGACCGTTT CGCGATGCAC
GGCGACCCGG CCGATCACGA CGCGTCGAAA CCAACCGTGT TCGCCACGCA CTCGACGCAC
AAGCTGCTCG CGGCGCTGTC GCAGGCCTCG TTCATCCATA TCCGCGACGG CCGCAATCCC
ATCGAACACG CACGCTTCAA CGAGTCATAC ATGATGCATG CGTCGACTTC GCCGCAATAC
GCGATCATTG CGTCGAACGA CGTCAGCGCC GCGATGATGG ACGGGCCCGG CGGCGAAGCG
CTCACGGGCG ACGCGATCCG CGAAGCGGTC GCATTCCGGC AGATGCTCGG CAGGCTGCAT
GCAAAATTCG ACGAACAGGG CGACTGGTTC TTCGATGGCT GGCAACCTGA AGTCGTCGTC
AATCGTCACA CGGGACGCCG CACGCCTTTC CACGAAGCCG ACGAAGAACT GCTCGCGACC
GATCCCTCGT GCTGGGTCCT CCATTCCAAC GATGCATGGC ACGGCTTCGG CGAGATCGAA
GACGGCTACT GCATGCTCGA TCCGATCAAG GTGTCGATCC TGACGCCGGG CGTCGCGCCG
CACGGCGGGC TGTTGTCGGT CGGCATTCCG GCTTGCGTCG TGACCGCGTA TCTCGCCCGG
CACGGCATCG TCGTCGAAAA GACCACCGAC TTCACGATCC TGCTGCTGTT TTCCATCGGC
ATCACCAAGG GCAAGTGGGG AACGCTCGTC AACACGCTGC TCGACTTCAA GCGCGATTAC
GACGCCAATC TGCCCCTCGA CCAGGCGTTG CCGAAACTGC CCGCCACCTG GCCGGAGCGA
TACAGCCGTC TCGGCCTGCG CGATCTGTGC GATCTGATGT TCGGCGCGAT GAACGACCTG
AAAACCACCG AGATGATGTC GCGTGGCTTC TCGACGCTGC CGCACCCCGA GTACAGCCCG
CAGGAAGCGT ACGAACTGCT GGTTCACAAC GAAGTAGAGG CGCTCGATCT GTCGCAGATG
GAAGGCCGCA CGGTGGCAAA TGCAGTCGTG CCGTACCCGC CCGGCATTCC GCTGCTGATG
CCCGGCGAGA ATGCGGGCCC CGCCGACGGG CCCTTGCTCG GCTATCTGAA AGCGCTCGAA
CGGTTCGACC TGCGCTTCCC GGGCTTCACG CACGACACAC ATGGCGTCGA AGTAGAGGAC
GGTGTGTATC GCATCGCCTG CATCAAGAAG AAGTAA
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| Protein sequence | MSSATESVYR RLGMKALLVH HASDARTASG RAAQSLADEL EERHVRVVTA ASADDAVSVI
RSDPLIQCLL LSWELGDDET HQQAQSVLDA QRVRSATVPI FLLASRTSAA TIPVDAMQKA
DDFIWMLEDT TSFIAGRIIA SIDRYRESVL PPMFGALARF SKVFEYSWHT PGHTGGTAFM
KSTVGQAFFE FFGEQLFRSD LSISVGELGS LLDHSGPIGE SERYAARVFG SHRTYHVTNG
SSMSNRVILM ASVTRNQIAL CDRNCHKSAE HAMTMSGAIP TYLIPSRNRY GIIGPIMPER
LTAAAIRLLI DQNPLVRDRD GVDPTPVHSL VTNSTYDGLC YNVTRLEELL GESVDRLHFD
EAWYGYARFN PLYKDRFAMH GDPADHDASK PTVFATHSTH KLLAALSQAS FIHIRDGRNP
IEHARFNESY MMHASTSPQY AIIASNDVSA AMMDGPGGEA LTGDAIREAV AFRQMLGRLH
AKFDEQGDWF FDGWQPEVVV NRHTGRRTPF HEADEELLAT DPSCWVLHSN DAWHGFGEIE
DGYCMLDPIK VSILTPGVAP HGGLLSVGIP ACVVTAYLAR HGIVVEKTTD FTILLLFSIG
ITKGKWGTLV NTLLDFKRDY DANLPLDQAL PKLPATWPER YSRLGLRDLC DLMFGAMNDL
KTTEMMSRGF STLPHPEYSP QEAYELLVHN EVEALDLSQM EGRTVANAVV PYPPGIPLLM
PGENAGPADG PLLGYLKALE RFDLRFPGFT HDTHGVEVED GVYRIACIKK K
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