| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6446 |
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| Symbol | |
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| ID | 6247985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 1026689 |
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| End bp | 1028941 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642598120 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001862522 |
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| Protein GI | 186471204 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0531] Amino acid transporters
[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.396159 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATC AACCGAAAAA AATGAACGTC GTGCAACTGA CGTTCATCGT TACCGTGAAC
ATGATGGGCT CGGGCATCAT CATGTTGCCT ACCAATATGG CGAAAGTCGG CGCGATCTCG
CTGCTGTCGT GGATCGTGAC GGCGCTGGGC TCGATGGCGA TCGCCTACGG CTTCGCGCAG
GCAGGCATCA TCAACCAGCG CGCGGGCGGC ATGGCTGCGT ATGCGGAAGA CGCGTACGGC
AAGCCCGGCT ACTTCCAGGT GTTCTTCCTG TATTTCCTGT CGCTGGCGAT CGCCAACGTC
GCCGTCGCGA GTTCCGCGCT CGGCTATCTG GCGGCGTTCT TCCCCATTCT GACCGCGTCG
CCCCTGGCGA CCTGCATCGG CGTGATCGCG CTGTTGTGGA TCACCACGGC GGCCAATTTC
GGCGGGCCGA AGCTGACGGG GCGCATCGGC TCGATCACCG TCTGGGGCGT GATTCTGCCT
GTCGGCTTCA TGTCGATTGC CGGATGGTTC TGGTTCAAGC CCGGCCTCTT CGCCGCCGCA
TGGAATCCGC AAGGACTGCG GCTCATCGAC GGCATGGGCT CCAGTATCGC GCTGACCTTG
TGGGCGTTCC TCGGGATGGA GTCGGCGGTG CAGAACTCGT CGGCCGTCGA GAACCCGAAG
CGCGACGTGC CGCTCGCCTG CCTGTTCGGC ACGCTCGGCG CCGCGGTCAT CTACGTGCTG
TCGACAACCG CGATCCAAGG CATCGTGCCC AACGCCGACC TCGCGAAATC GACGGGTCCG
TTCGGTCTCG CGTTCGCGCA TATGTTCAGC CCCATGATCG GCTCGATCGT GATGGCGCTA
GCGGCAATGG CCTGCGTCGG CTCGCTGCTC GGCTGGCAGT TCACGCTCGC GCAGACCGCG
AAGGACGCGG CCGACAGCAA CATGTTCCCG TCGATTTTCA GCAAGGCCAG TCATAATGGC
GCGCCGATTC CGGGCATGAT CATCATGGGT ATCGTGCAGT CGCTGATGGC GCTGTCGACG
ATTTCGCCCA ACCTGGCCGA GCAGTTCGCG GCGCTCGTCA ATCTCGCCGT GGTGACGAAC
GTGTTGCCTT ACATCATCTC GCTGTCGGCG CTGTTCGTGA TGATGCGCGA CGCGGGCACG
GAACCCGCTG TCTACCGGCG CAACGGCATC GTCGCCGTGA TCGCGATGGT CTACTCGGTC
TACGCGCTCT ATGCGTCGGG CAAGGATGCC GTGCTTGGCG GCATGCTGGT GATGGCAATC
GGCTACGTGA TCTACGGTTT CATCGCGCCG CGTCTGTCGC TGCTGGGCGC CAAGGCCCGC
AAGCCGACCA TCGCTGCGGC CAGCATCATT GCCTTCCTCG TGCTCTGCGC CCCGGCTCCG
CGCCCGGCGC ATGCAGCGGG CGCGAGTGCC GCGCAGTCGG GCGCACTCGC GCGGATCAAG
CAAACGGGCA AGATCAACAT CGGCTATGTC GACGTGGCGA GCCCGTTCGT CTACCGCGAC
AGCGAAGGCC GCGCGGTGGG CTACCTGGCA GGCATCTGCC AGGGCGTCGC AGACCAGGTA
AAGAGCAGAC TGAGCCTTCC CGCGCTGACC GTGAACTGGA TACAGGTCTC TTCCGACGAA
CGCTACCGCG CGCTGCAGGA TCACCGGATC GACCTGTTGT GCGGCGATCC TGAAACGCTG
ACGGGCCGCC AGTTCATCAG CTATTCCGTG CCCGTCTATC CGGGCGGCGT CGGCGCGTTG
ATGCGCACGG ATGCGGCACG CGGGCTCAAG GAACTGCTGA GCGGCGCCGA CATCGAGGCT
CATGGCCCGA TCTGGCGTGC GTCGCCCGCG CAGTTGCTGA ACGCGCAGAC GTTCTCGGCC
GTGAAGGATA CGCCCACGGC GCGCTGGCTC AACGACCGCA TCAGGGAGTT CAAGCTGACC
GCGCGCGTCG TCACTGTGTC GAGTCATGAA GAAGGCGTAC GGCAAGTGCT CGACCGGAAA
ACCAATGTTT TCTTCGCGGA GCGGCAGATC CTGCAGGATG CCGTCAAGCG CAGCACGGCA
TCGGACAGCC TGCAGGTCCT GCAGCGCCGC TTCACCGTCG TGCTCGTGTC GCTCGGCGTC
GCGCGCGAGG ACGAAGACAT GCGTCTGTTC GTCGATCAAT CGCTGAGCAA GATGTATACG
TCGGGTGCCT ATCGCGGGCT CTTTGTGAAG TGGTTCGGCG AGCCGGATGA GGACACGAAG
AAGTTCTATC GGGCGGCTAT CTTGCCCGAG TAA
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| Protein sequence | MADQPKKMNV VQLTFIVTVN MMGSGIIMLP TNMAKVGAIS LLSWIVTALG SMAIAYGFAQ
AGIINQRAGG MAAYAEDAYG KPGYFQVFFL YFLSLAIANV AVASSALGYL AAFFPILTAS
PLATCIGVIA LLWITTAANF GGPKLTGRIG SITVWGVILP VGFMSIAGWF WFKPGLFAAA
WNPQGLRLID GMGSSIALTL WAFLGMESAV QNSSAVENPK RDVPLACLFG TLGAAVIYVL
STTAIQGIVP NADLAKSTGP FGLAFAHMFS PMIGSIVMAL AAMACVGSLL GWQFTLAQTA
KDAADSNMFP SIFSKASHNG APIPGMIIMG IVQSLMALST ISPNLAEQFA ALVNLAVVTN
VLPYIISLSA LFVMMRDAGT EPAVYRRNGI VAVIAMVYSV YALYASGKDA VLGGMLVMAI
GYVIYGFIAP RLSLLGAKAR KPTIAAASII AFLVLCAPAP RPAHAAGASA AQSGALARIK
QTGKINIGYV DVASPFVYRD SEGRAVGYLA GICQGVADQV KSRLSLPALT VNWIQVSSDE
RYRALQDHRI DLLCGDPETL TGRQFISYSV PVYPGGVGAL MRTDAARGLK ELLSGADIEA
HGPIWRASPA QLLNAQTFSA VKDTPTARWL NDRIREFKLT ARVVTVSSHE EGVRQVLDRK
TNVFFAERQI LQDAVKRSTA SDSLQVLQRR FTVVLVSLGV AREDEDMRLF VDQSLSKMYT
SGAYRGLFVK WFGEPDEDTK KFYRAAILPE
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