| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6445 |
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| Symbol | |
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| ID | 6247984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 1024293 |
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| End bp | 1026656 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642598119 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_001862521 |
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| Protein GI | 186471203 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.621476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.414615 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCCTC GATCCATCAA AGCGCCAACC ATTCCGATTG CCTTCCACAA GCTATTGAAG
GTCGTCGCCA TCGTGGATGG CAACGACGCG CAGAGCGGCG AATTGCTGGC GGAGATCACC
GCGGAGCATT ACCGTGTCGA AGTGACCGAC AGCTACACAC GCGATGTCAA CGAAGATGCC
GATGTCGGCG CCTACATCAT CCTCATCGAC GGGGCACGCC TCGAGCCGGC GCGCAAGCTC
GCCGCGGCCG TGCGGTCGCT CGGCTTCCGT ACGCCGCTCT GGGCGCTGGC CAACACACAC
CGGCTGTCGG ATCTCGCAGT GACGGGCGGA CTCGGCGAAG TCGACGGCTA TATCTATCTG
GGACAGCAAT CGCCCATTTT CTACGCGAAG CAGGTGATGG GGAGCCTCGT CAAATACGGC
TTGAGTCTGC TGCCGCCCTT CTTCGGCGGA CTCGTCGCGT ACGACGCGGA AGCGAACATC
GCATTCGATT GCCCCGGTCA TCAGGGCGGG CAGTTTTATC GGAAGTCGCC CGCCGGCCAG
CTGTTCTTCA AGCACTTCGG CGAAAGCATT TTCAGAAACG ACCTCTGCAA TGCCGATGTC
GATCTCGGCG ACCTGCTGAT TCACGAAGGC GCCGCGGCCG ACGCCCAGCG CCACGCCGCC
GAGGTATTCG GCGCTGACCA GACCTATTTC GTGCTCAACG GAACCAGCAC GTCCAACAAA
ATCGTGACAG GCGCGGTGCT CAAACGCGGC GACCTCGTGC TCTTCGACCG CAACAATCAC
AAATCGCTGC ATCAGGGCGC GCTGGTGCAG GCAGGCGCCA TTCCCATCTT CCTGCCGACA
TCGCGCAACG CGTTCGGCAT GATCGGCGCC GTCGACTGGG AGGCATGGAG CGAAGATTAT
CTGCGCGAGC AGATCCGCAA CAGCCCGCTC GTCGAAGATC GCGAACGCGC CGGCGCCGCA
CGTCCGTTCC GGCTCGCCTG CATTCAGCTC GCGACCTACG ACGGAACGAT CTACAACGTC
CGCAAAGTGC TGGAACGGAT CGGCCACCTG TGCGACTACG TGCTGTGGGA TGAAGCGTGG
ATTGGTTACA ACGCGTTCCA TCCGCTGTTC AACGATCACA GCCCGATGCG GCTGAAGGAC
CTGACGCCCG ACATGCCTGG CCTGTTCTCC ACCCAGTCCG TTCATAAGCA GGGTGCCGGT
TTTTCGCAGG CGTCCCAGGT TCATAAGCGA GACGAGCATA TTCGCGGACA GAAGCGCTAT
ATCGAACACA AACGTTTCAA CGAATCGTTC CTGATCCACG CAAGCACCTC GCCCTTCTAT
CCGCTGTTCG CATCGCTCGA CGTCAACGCC AAAGTCCACG AAGGCAAAGC GGGAGAAATG
CTCTGGGACA GCTGCATCGA ACTCGGCATC GAGGCGCGCA AGAAGTTTCG CCAGTTCGCG
CGCCACTATG AGGTGACGGG CAGGAACGCG CAGGAACAAT GGTTCTTCGA TCCTTTCGTG
CCGGACGTCG TCGATATCCG CAATTCGAAT TTCATGGCCG ATGCGTCGAA TGTCATGTGG
GAAGACATTC CGACGGATGT CATCAAGCAC GAGCAGCAAT GCTGGGAGTT CCGTCCGGAA
GCGGCGTGGC ACGGCTACAC GGGTTACGCC GACGGCTATG TGATGGCGGA CCCGAACAAG
CTGAATCTGC TGACACCGGG CATCGACCGG AAGACGGGCG AATATCTCGA CTTCGGCGTG
CCAGCGACGG TGGTGGCGAA TTATCTGCGC GAGGAAGGGA TCGTCCCCGA GAAGTGCGAC
CTGAACAGCC TGCTCTTCCT GATGACGCCC GCCGAAGACG AAAGCAAGCT GAACACGCTG
ATCGCACGCT TCGTCAAGTT CAAGAACCTG TGGGACCGCG ATGCCGCGCT GGCGGAAGTC
CTGCCTTCGT TGTGCGCGGC GCACGGAAGT CGTTACCAGG GCTACACGCT GCGCCAGGTG
TGCAACGAGA TGCACACGTT CTATCGAGAG GCCAACGTGA AGAACCTGCA GAGACTGTGC
TTCCGCGCGT CGAGCTTCCC GGAACTGGCG ATGTCGCCGA AAGAAGCCTA TGAAGCGCTC
GTCGCAAACC GCGTCGACTA CGTGCCGCTC GATCAGGCAA AGAACCGCAT TTCCGCCACG
CTGGCGCTGA TCTATCCGCC AGGCATCGGC GTCGTGCTGC CCGGCGAACG TTGGGATGAC
CGTGCCCAAC CGATGCTGGA TTACTTCATG GCGTTTCAGG AATCGTTCAA TCGCTTCCCC
GGCTTCAATT ACGAAGTCCA GGGCGTGTTC CAGGAACGCG AAGACGGTCG CATCCGTTTC
TATACGTACG TGGTCAGTGA ATAA
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| Protein sequence | MVPRSIKAPT IPIAFHKLLK VVAIVDGNDA QSGELLAEIT AEHYRVEVTD SYTRDVNEDA
DVGAYIILID GARLEPARKL AAAVRSLGFR TPLWALANTH RLSDLAVTGG LGEVDGYIYL
GQQSPIFYAK QVMGSLVKYG LSLLPPFFGG LVAYDAEANI AFDCPGHQGG QFYRKSPAGQ
LFFKHFGESI FRNDLCNADV DLGDLLIHEG AAADAQRHAA EVFGADQTYF VLNGTSTSNK
IVTGAVLKRG DLVLFDRNNH KSLHQGALVQ AGAIPIFLPT SRNAFGMIGA VDWEAWSEDY
LREQIRNSPL VEDRERAGAA RPFRLACIQL ATYDGTIYNV RKVLERIGHL CDYVLWDEAW
IGYNAFHPLF NDHSPMRLKD LTPDMPGLFS TQSVHKQGAG FSQASQVHKR DEHIRGQKRY
IEHKRFNESF LIHASTSPFY PLFASLDVNA KVHEGKAGEM LWDSCIELGI EARKKFRQFA
RHYEVTGRNA QEQWFFDPFV PDVVDIRNSN FMADASNVMW EDIPTDVIKH EQQCWEFRPE
AAWHGYTGYA DGYVMADPNK LNLLTPGIDR KTGEYLDFGV PATVVANYLR EEGIVPEKCD
LNSLLFLMTP AEDESKLNTL IARFVKFKNL WDRDAALAEV LPSLCAAHGS RYQGYTLRQV
CNEMHTFYRE ANVKNLQRLC FRASSFPELA MSPKEAYEAL VANRVDYVPL DQAKNRISAT
LALIYPPGIG VVLPGERWDD RAQPMLDYFM AFQESFNRFP GFNYEVQGVF QEREDGRIRF
YTYVVSE
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