| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6413 |
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| Symbol | |
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| ID | 6247952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 990038 |
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| End bp | 991564 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642598087 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001862489 |
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| Protein GI | 186471171 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.905746 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAGA AAGCCTCCAT CTTCGCTTCA CTGCTCGCAA CGCCCACGCC CGGGAAGGCC
GTGGTCAGCC CGTCGGTGCG GGCCGCGCTG CTATCGGCGC TGTTCGACAA CGCGTGGCCG
CTGTTCCTGT CAGGCATCTC GAGCGTGTTT GTGGCGATCG TCGCGTGCGT CCGGCTGCAT
CAGACGTGGG CAGTGCTCTG GCTGATCGCC GATATGGCCG TGCTCGCCAC GCGGCTCGGC
ATCGTCCGCA CTTACGTGGC TCGCAGCCGC GTCTGCGCGG TCCATCCCGG CCCGTGGGCG
GCCCGCTATG CGCCCGTGGG TCTCTGCGCA TGCCTGCTGC TCGGTCTCGG CACGGCGGCC
TGCTTTCTGT CGCCGGACAA GGAGCTGGCG ACGCTCTCGA TCATGGTCGC AGCGGGCATA
CTCGGCGGCA TCGCGTCACG CAACGCGGCG CTGCCGCGGC TCGCTATCGC GCAGATCCTG
CTCGGCACGA TGCCCATCGG TATCGGCGCG CTGCTTGCGC CGCAAAGCGG CGCATGGATT
CTCGTGCCGC CCCTCATCGC CTACAACGCC GCGATGGTCT CGGTCGTGCG ACGCCATTAC
CAGGGGCTCG TTGCGCTGAT GACTGCCGAG CAGCGGCACG CCGAACTCGC CGCGCGCTTC
GATGCGGCGC TCGCCCACAT GCCGCATGGC CTGTGCACCG TCGACGGCGC GGGCAACGTG
GTCATTGCGA ACCGCCGCAC GGCCGAGCTG TTTGGCGCGA CTGTCGAGCG GTTGAAGCTG
AATGTGCCGC TGCCCGAATT CATCGGCCAT GTGGGCATCG CGCAGTTCGG CGAAACCTTG
CACAAGCGGC TCGTCGAGCA GTGCAATGCA TGGCTTGGCG ACGGGCATGG CCCGCTCGAC
CCGATGGATC TCGAACTCGA GGATGGCCGC CAGCTCGAGT TGACCCGCAA CCCGGTGCCC
GACGGCAGCG CCGTCATCAT CATCGAGGAC GTCACGCAAC GGCGGCAGAC GGAGGCGAAG
ATCCTGCACC TCGCAAGTCA CGACTCGTTG ACGGGGCTGC CGAATCGCCG GGAATTGCGC
GACCGGCTCG AACAGATCCT GAGCGTGCGG GCGCGGCCGC AGGGCGGATC CGTCGCGATG
ATGTATCTGG ATCTGGACGG CTTCAAGCAG GTCAACGACC GGCTCGGCCA TTGCGCGGGG
GATGAAGTGC TGGAGACGGT CGCCGCGCGG CTCTCGCGCG TGCTGCGTCC CGGCGAACTG
GTCGCGCGGC TGGGCGGCGA CGAGTTTGCG ATTATCGCGG ATCACACGAC GCTGCCGTCC
GTCGTTGCGC TCGCGCAGCG CGTGATCCGC GACATCGCGC TGCCGTATCA CCTGTCGACG
GGCGAGGCGG TGAGCATCGG CACGAGCGTC GGCATTGCGC TCGCGGCGAA CGACGACTCC
GTCGACGGCC TGATCCGGCG CGCGGATCAG GCGTTGTACA GCGCGAAGCA GGCTGGCCGG
GGCACGTATC GCGTGGCGAA CGCCTAG
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| Protein sequence | MSEKASIFAS LLATPTPGKA VVSPSVRAAL LSALFDNAWP LFLSGISSVF VAIVACVRLH
QTWAVLWLIA DMAVLATRLG IVRTYVARSR VCAVHPGPWA ARYAPVGLCA CLLLGLGTAA
CFLSPDKELA TLSIMVAAGI LGGIASRNAA LPRLAIAQIL LGTMPIGIGA LLAPQSGAWI
LVPPLIAYNA AMVSVVRRHY QGLVALMTAE QRHAELAARF DAALAHMPHG LCTVDGAGNV
VIANRRTAEL FGATVERLKL NVPLPEFIGH VGIAQFGETL HKRLVEQCNA WLGDGHGPLD
PMDLELEDGR QLELTRNPVP DGSAVIIIED VTQRRQTEAK ILHLASHDSL TGLPNRRELR
DRLEQILSVR ARPQGGSVAM MYLDLDGFKQ VNDRLGHCAG DEVLETVAAR LSRVLRPGEL
VARLGGDEFA IIADHTTLPS VVALAQRVIR DIALPYHLST GEAVSIGTSV GIALAANDDS
VDGLIRRADQ ALYSAKQAGR GTYRVANA
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